Estimation of effective connectivity via data-driven neural modeling

被引:37
作者
Freestone, Dean R. [1 ,2 ]
Karoly, Philippa J. [1 ,2 ]
Nesic, Dragan [2 ]
Aram, Parham [3 ]
Cook, Mark J. [1 ]
Grayden, David B. [2 ,4 ]
机构
[1] Univ Melbourne, St Vincents Hosp Melbourne, Dept Med, Fitzroy, Vic 3065, Australia
[2] Univ Melbourne, Dept Elect & Elect Engn, NeuroEngn Lab, Parkville, Vic 3052, Australia
[3] Univ Sheffield, Dept Automat Control & Syst Engn, Sheffield, S Yorkshire, England
[4] Univ Melbourne, Ctr Neural Engn, Parkville, Vic 3052, Australia
基金
澳大利亚研究理事会;
关键词
functional connectivity; neural mass model; model inversion; Kalman filter; epilepsy; seizures; parameter estimation; effective connectivity; FUNCTIONAL CONNECTIVITY; MASS MODEL; EEG; GENERATION; PREDICTION; RESPONSES; DYNAMICS; EPILEPSY; CORTEX;
D O I
10.3389/fnins.2014.00383
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
This research introduces a new method for functional brain imaging via a process of model inversion. By estimating parameters of a computational model, we are able to track effective connectivity and mean membrane potential dynamics that cannot be directly measured using electrophysiological measurements alone. The ability to track the hidden aspects of neurophysiology will have a profound impact on the way we understand and treat epilepsy. For example, under the assumption the model captures the key features of the cortical circuits of interest, the framework will provide insights into seizure initiation and termination on a patient-specific basis. It will enable investigation into the effect a particular drug has on specific neural populations and connectivity structures using minimally invasive measurements. The method is based on approximating brain networks using an interconnected neural population model. The neural population model is based on a neural mass model that describes the functional activity of the brain, capturing the mesoscopic biophysics and anatomical structure. The model is made subject-specific by estimating the strength of intra-cortical connections within a region and inter-cortical connections between regions using a novel Kalman filtering method. We demonstrate through simulation how the framework can be used to track the mechanisms involved in seizure initiation and termination.
引用
收藏
页数:20
相关论文
共 63 条
[1]   Seizure prediction in hippocampal and neocortical epilepsy using a model-based approach [J].
Aarabi, Ardalan ;
He, Bin .
CLINICAL NEUROPHYSIOLOGY, 2014, 125 (05) :930-940
[2]   Characterisation of cortical activity in response to deep brain stimulation of ventral-lateral nucleus: Modelling and experiment [J].
Adhikari, Mohit H. ;
Heeroma, Joost H. ;
di Bernardo, Mario ;
Krauskopf, Bernd ;
Richardson, Mark P. ;
Walker, Matthew C. ;
Terry, John R. .
JOURNAL OF NEUROSCIENCE METHODS, 2009, 183 (01) :77-85
[3]   Indications of nonlinear deterministic and finite-dimensional structures in time series of brain electrical activity: Dependence on recording region and brain state [J].
Andrzejak, RG ;
Lehnertz, K ;
Mormann, F ;
Rieke, C ;
David, P ;
Elger, CE .
PHYSICAL REVIEW E, 2001, 64 (06) :8-061907
[4]  
[Anonymous], 1974, BIOL CYBERN
[5]   Spatiotemporal multi-resolution approximation of the Amari type neural field model [J].
Aram, P. ;
Freestone, D. R. ;
Dewar, M. ;
Scerri, K. ;
Jirsa, V. ;
Grayden, D. B. ;
Kadirkamanathan, V. .
NEUROIMAGE, 2013, 66 :88-102
[6]   A framework for nonlinear sampled-data observer design via approximate discrete-time models and emulation [J].
Arcak, M ;
Nesic, D .
AUTOMATICA, 2004, 40 (11) :1931-1938
[7]   Multi-area neural mass modeling of EEG and MEG signals [J].
Babajani-Feremi, Abbas ;
Soltanian-Zadeh, Hamid .
NEUROIMAGE, 2010, 52 (03) :793-811
[8]   FUNCTIONAL CONNECTIVITY IN THE MOTOR CORTEX OF RESTING HUMAN BRAIN USING ECHO-PLANAR MRI [J].
BISWAL, B ;
YETKIN, FZ ;
HAUGHTON, VM ;
HYDE, JS .
MAGNETIC RESONANCE IN MEDICINE, 1995, 34 (04) :537-541
[9]   The dynamic evolution of focal-onset epilepsies - combining theoretical and clinical observations [J].
Blenkinsop, Alex ;
Valentin, Antonio ;
Richardson, Mark P. ;
Terry, John R. .
EUROPEAN JOURNAL OF NEUROSCIENCE, 2012, 36 (02) :2188-2200
[10]   Functional interactions of the inferior frontal cortex during the processing of words and word-like stimuli [J].
Bokde, ALW ;
Tagamets, MA ;
Friedman, RB ;
Horwitz, B .
NEURON, 2001, 30 (02) :609-617