Protein-fragment complementation assays for large-scale analysis of protein-protein interactions

被引:19
|
作者
Blaszczak, Ewa [1 ]
Lazarewicz, Natalia [1 ,2 ]
Sudevan, Aswani [2 ]
Wysocki, Robert [1 ]
Rabut, Gwenael [2 ]
机构
[1] Univ Wroclaw, Fac Biol Sci, Dept Genet & Cell Physiol, Kanonia 6-8, PL-50328 Wroclaw, Poland
[2] Univ Rennes, IGDR Inst Genet & Dev Rennes, CNRS, UMR 6290, F-35000 Rennes, France
关键词
BIMOLECULAR FLUORESCENCE COMPLEMENTATION; IN-VIVO; DIHYDROFOLATE-REDUCTASE; DRUG DISCOVERY; LIVING CELLS; CDNA LIBRARY; MAP; REPORTER; VISUALIZATION; COMPLEXES;
D O I
10.1042/BST20201058
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Protein-protein interactions (PPIs) orchestrate nearly all biological processes. They are also considered attractive drug targets for treating many human diseases, including cancers and neurodegenerative disorders. Protein-fragment complementation assays (PCAs) provide a direct and straightforward way to study PPIs in living cells or multicellular organisms. Importantly, PCAs can be used to detect the interaction of proteins expressed at endogenous levels in their native cellular environment. In this review, we present the principle of PCAs and discuss some of their advantages and limitations. We describe their application in large-scale experiments to investigate PPI networks and to screen or profile PPI targeting compounds.
引用
收藏
页码:1337 / 1348
页数:12
相关论文
共 50 条
  • [31] Investigating the Role of Large-Scale Domain Dynamics in Protein-Protein Interactions
    Delaforge, Elise
    Milles, Sigrid
    Huang, Jie-rong
    Bouvier, Denis
    Jensen, Malene Ringkjobing
    Sattler, Michael
    Hart, Darren J.
    Blackledge, Martin
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2016, 3
  • [32] Efficiently predicting large-scale protein-protein interactions using MapReduce
    Hu, Lun
    Yuan, Xiaohui
    Hu, Pengwei
    Chan, Keith C. C.
    COMPUTATIONAL BIOLOGY AND CHEMISTRY, 2017, 69 : 202 - 206
  • [33] A large scale analysis of protein-protein interactions in Mesorhizobium loti
    Shimoda, Y
    Nakamura, Y
    Tabata, S
    Sato, S
    PLANT AND CELL PHYSIOLOGY, 2006, 47 : S58 - S58
  • [34] Large-scale mapping of human protein-protein interactions by mass spectrometry
    Ewing, Rob M.
    Chu, Peter
    Elisma, Fred
    Li, Hongyan
    Taylor, Paul
    Climie, Shane
    McBroom-Cerajewski, Linda
    Robinson, Mark D.
    O'Connor, Liam
    Li, Michael
    Taylor, Rod
    Dharsee, Moyez
    Ho, Yuen
    Heilbut, Adrian
    Moore, Lynda
    Zhang, Shudong
    Ornatsky, Olga
    Bukhman, Yury V.
    Ethier, Martin
    Sheng, Yinglun
    Vasilescu, Julian
    Abu-Farha, Mohamed
    Lambert, Jean-Philippe
    Duewel, Henry S.
    Stewart, Ian I.
    Kuehl, Bonnie
    Hogue, Kelly
    Colwill, Karen
    Gladwish, Katharine
    Muskat, Brenda
    Kinach, Robert
    Adams, Sally-Lin
    Moran, Michael F.
    Morin, Gregg B.
    Topaloglou, Thodoros
    Figeys, Daniel
    MOLECULAR SYSTEMS BIOLOGY, 2007, 3 (1)
  • [35] Comparative assessment of large-scale data sets of protein-protein interactions
    von Mering, C
    Krause, R
    Snel, B
    Cornell, M
    Oliver, SG
    Fields, S
    Bork, P
    NATURE, 2002, 417 (6887) : 399 - 403
  • [36] Initial large-scale exploration of protein-protein interactions in human brain
    Chen, JY
    Sivachenko, AY
    Bell, R
    Kurschner, C
    Ota, I
    Sahasrabudhe, S
    PROCEEDINGS OF THE 2003 IEEE BIOINFORMATICS CONFERENCE, 2003, : 229 - 234
  • [37] Fluorescent and Bioluminescent Protein-Fragment Complementation Assays in the Study of G Protein-Coupled Receptor Oligomerization and Signaling
    Vidi, Pierre-Alexandre
    Watts, Val J.
    MOLECULAR PHARMACOLOGY, 2009, 75 (04) : 733 - 739
  • [38] Detection of protein–protein interactions using a simple survival protein-fragment complementation assay based on the enzyme dihydrofolate reductase
    Ingrid Remy
    F X Campbell-Valois
    Stephen W Michnick
    Nature Protocols, 2007, 2 : 2120 - 2125
  • [39] Protein complementation assays: Approaches for the in vivo analysis of protein interactions
    Morell, Montse
    Ventura, Salvador
    Aviles, Francesc X.
    FEBS LETTERS, 2009, 583 (11): : 1684 - 1691
  • [40] The analysis of protein-protein interactions in plants by bimolecular fluorescence complementation
    Ohad, Nir
    Shichrur, Keren
    Yalovsky, Shaul
    PLANT PHYSIOLOGY, 2007, 145 (04) : 1090 - 1099