Frechet ChemNet Distance: A Metric for Generative Models for Molecules in Drug Discovery

被引:177
|
作者
Preuer, Kristina
Renz, Philipp
Unterthiner, Thomas
Hochreiter, Sepp
Klambauer, Guenter [1 ]
机构
[1] Johannes Kepler Univ Linz, LIT AI Lab, A-4040 Linz, Austria
关键词
PREDICTION;
D O I
10.1021/acs.jcim.8b00234
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
The new wave of successful generative models in machine learning has increased the interest in deep learning driven de novo drug design. However, method comparison is difficult because of various flaws of the currently employed evaluation metrics. We propose an evaluation metric for generative models called Frechet ChemNet distance (FCD). The advantage of the FCD over previous metrics is that it can detect whether generated molecules are diverse and have similar chemical and biological properties as real molecules.
引用
收藏
页码:1736 / 1741
页数:6
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