New gSSR and EST-SSR markers reveal high genetic diversity in the invasive plant Ambrosia artemisiifolia L. and can be transferred to other invasive Ambrosia species

被引:20
作者
Meyer, Lucie [1 ]
Causse, Romain [1 ]
Pernin, Fanny [1 ]
Scalone, Romain [3 ]
Bailly, Geraldine [2 ]
Chauvel, Bruno [1 ]
Delye, Christophe [1 ]
Le Corre, Valerie [1 ]
机构
[1] Univ Bourgogne Franche Comte, INRA, AgroSup Dijon, Agroecol, Dijon, France
[2] BASF France SAS, Sustainable Agr Dept, Ecully, France
[3] Swedish Univ Agr Sci, Dept Crop Prod Ecol, Uppsala, Sweden
来源
PLOS ONE | 2017年 / 12卷 / 05期
关键词
MULTILOCUS GENOTYPE DATA; COMMON RAGWEED; POPULATION-STRUCTURE; CLIMATE-CHANGE; NULL ALLELES; R-PACKAGE; ASTERACEAE; LOCI; EUROPE; TESTS;
D O I
10.1371/journal.pone.0176197
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Ambrosia artemisiifolia L., (common ragweed), is an annual invasive and highly troublesome plant species originating from North America that has become widespread across Europe. New sets of genomic and expressed sequence tag (EST) based simple sequence repeats (SSRs) markers were developed in this species using three approaches. After validation, 13 genomic SSRs and 13 EST-SSRs were retained and used to characterize the genetic diversity and population genetic structure of Ambrosia artemisiifolia populations from the native (North America) and invasive (Europe) ranges of the species. Analysing the mating system based on maternal families did not reveal any departure from complete allogamy and excess homozygosity was mostly due the presence of null alleles. High genetic diversity and patterns of genetic structure in Europe suggest two main introduction events followed by secondary colonization events. Cross-species transferability of the newly developed markers to other invasive species of the Ambrosia genus was assessed. Sixty-five percent and 75% of markers, respectively, were transferable from A. artemisiifolia to Ambrosia psilostachya and Ambrosia tenuifolia. 40% were transferable to Ambrosia trifida, this latter species being seemingly more phylogenetically distantly related to A. artemisiifolia than the former two.
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页数:20
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