Cryo-electron tomography;
Electron cryotomography;
Cryo-EM;
Tilt series;
Data acquisition;
Throughput;
K2;
K3;
Calibration;
STRUCTURAL BIOLOGY;
IN-SITU;
SUBTOMOGRAM;
D O I:
10.1016/j.jsb.2019.08.006
中图分类号:
Q5 [生物化学];
Q7 [分子生物学];
学科分类号:
071010 ;
081704 ;
摘要:
The power of cryo-electron tomography (cryoET) lies in its capability to characterize macromolecules in their cellular context. Structure determination by cryoET, however, is time-consuming compared to single particle approaches. A recent study reported significant acceleration of data acquisition by a fast-incremental single-exposure (FISE) tilt series scheme. Here we improved the method and evaluated its efficiency and performance. We show that (1) FISE combined with the latest generation of direct electron detectors speeds up collection considerably, (2) previous generation (pre-2017) double-tilt axis Titan Krios holders are also suitable for FISE data acquisition, (3) x, y and z-specimen shifts can be compensated for, and (4) FISE tilt series data can generate averages of sub-nanometer resolution. These advances will allow for a widespread adoption of cryoET for high-throughput in situ studies and high-resolution structure determination across different biological research disciplines.
机构:
CALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USACALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USA
Chreifi, Georges
;
Chen, Songye
论文数: 0引用数: 0
h-index: 0
机构:
CALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USA
CALTECH, Beckman Inst, Pasadena, CA 91125 USACALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USA
Chen, Songye
;
Metskas, Lauren Ann
论文数: 0引用数: 0
h-index: 0
机构:
CALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USA
CALTECH, Howard Hughes Med Inst, Pasadena, CA 91125 USACALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USA
Metskas, Lauren Ann
;
Kaplan, Mohammed
论文数: 0引用数: 0
h-index: 0
机构:
CALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USACALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USA
Kaplan, Mohammed
;
Jensen, Grant J.
论文数: 0引用数: 0
h-index: 0
机构:
CALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USA
CALTECH, Beckman Inst, Pasadena, CA 91125 USA
CALTECH, Howard Hughes Med Inst, Pasadena, CA 91125 USACALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USA
机构:
Howard Hughes Med Inst, Janelia Res Campus, Ashburn, VA USAHoward Hughes Med Inst, Janelia Res Campus, Ashburn, VA USA
Grant, Timothy
;
Grigorieff, Nikolaus
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Janelia Res Campus, Ashburn, VA USA
Brandeis Univ, Rosenstiel Basic Med Sci Res Ctr, Dept Biochem, Waltham, MA 02254 USAHoward Hughes Med Inst, Janelia Res Campus, Ashburn, VA USA
机构:
Univ Pittsburgh, Sch Med, Dept Biol Struct, Pittsburgh, PA 15260 USA
Howard Hughes Med Inst, Janelia Res Campus, Ashburn, VA USAUniv Pittsburgh, Sch Med, Dept Biol Struct, Pittsburgh, PA 15260 USA
Himes, Benjamin A.
;
Zhang, Peijun
论文数: 0引用数: 0
h-index: 0
机构:
Univ Pittsburgh, Sch Med, Dept Biol Struct, Pittsburgh, PA 15260 USA
Univ Oxford, Wellcome Trust Ctr Human Genet, Div Struct Biol, Oxford, England
Electron Bio Imaging Ctr, Diamond Light Source, Didcot, Oxon, EnglandUniv Pittsburgh, Sch Med, Dept Biol Struct, Pittsburgh, PA 15260 USA
机构:
CALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USACALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USA
Chreifi, Georges
;
Chen, Songye
论文数: 0引用数: 0
h-index: 0
机构:
CALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USA
CALTECH, Beckman Inst, Pasadena, CA 91125 USACALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USA
Chen, Songye
;
Metskas, Lauren Ann
论文数: 0引用数: 0
h-index: 0
机构:
CALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USA
CALTECH, Howard Hughes Med Inst, Pasadena, CA 91125 USACALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USA
Metskas, Lauren Ann
;
Kaplan, Mohammed
论文数: 0引用数: 0
h-index: 0
机构:
CALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USACALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USA
Kaplan, Mohammed
;
Jensen, Grant J.
论文数: 0引用数: 0
h-index: 0
机构:
CALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USA
CALTECH, Beckman Inst, Pasadena, CA 91125 USA
CALTECH, Howard Hughes Med Inst, Pasadena, CA 91125 USACALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USA
机构:
Howard Hughes Med Inst, Janelia Res Campus, Ashburn, VA USAHoward Hughes Med Inst, Janelia Res Campus, Ashburn, VA USA
Grant, Timothy
;
Grigorieff, Nikolaus
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Janelia Res Campus, Ashburn, VA USA
Brandeis Univ, Rosenstiel Basic Med Sci Res Ctr, Dept Biochem, Waltham, MA 02254 USAHoward Hughes Med Inst, Janelia Res Campus, Ashburn, VA USA
机构:
Univ Pittsburgh, Sch Med, Dept Biol Struct, Pittsburgh, PA 15260 USA
Howard Hughes Med Inst, Janelia Res Campus, Ashburn, VA USAUniv Pittsburgh, Sch Med, Dept Biol Struct, Pittsburgh, PA 15260 USA
Himes, Benjamin A.
;
Zhang, Peijun
论文数: 0引用数: 0
h-index: 0
机构:
Univ Pittsburgh, Sch Med, Dept Biol Struct, Pittsburgh, PA 15260 USA
Univ Oxford, Wellcome Trust Ctr Human Genet, Div Struct Biol, Oxford, England
Electron Bio Imaging Ctr, Diamond Light Source, Didcot, Oxon, EnglandUniv Pittsburgh, Sch Med, Dept Biol Struct, Pittsburgh, PA 15260 USA