Can aggressive cancers be identified by the "aggressiveness" of their chromatin?

被引:6
|
作者
Gurova, Katerina [1 ]
机构
[1] Roswell Pk Comprehens Canc Ctr, Dept Cell Stress Biol, Elm & Carlton Str, Buffalo, NY 14263 USA
关键词
3D nuclear architecture; cancer; cancer diagnostic; cancer prognosis; chromatin; enhancer-promoter interactions; unstable chromatin; TRANSCRIPTION FACTOR; BARR BODY; DNA; CELLS; TUMOR; HETEROGENEITY; NUCLEOSOME; EXPRESSION; GENOME; BREAST;
D O I
10.1002/bies.202100212
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Phenotypic plasticity is a crucial feature of aggressive cancer, providing the means for cancer progression. Stochastic changes in tumor cell transcriptional programs increase the chances of survival under any condition. I hypothesize that unstable chromatin permits stochastic transitions between transcriptional programs in aggressive cancers and supports non-genetic heterogeneity of tumor cells as a basis for their adaptability. I present a mechanistic model for unstable chromatin which includes destabilized nucleosomes, mobile chromatin fibers and random enhancer-promoter contacts, resulting in stochastic transcription. I suggest potential markers for "unsettled" chromatin in tumors associated with poor prognosis. Although many of the characteristics of unstable chromatin have been described, they were mostly used to explain changes in the transcription of individual genes. I discuss approaches to evaluate the role of unstable chromatin in non-genetic tumor cell heterogeneity and suggest using the degree of chromatin instability and transcriptional noise in tumor cells to predict cancer aggressiveness.
引用
收藏
页数:19
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