Isolation and characterization of microsatellite loci in the black rat snake (Elaphe obsoleta)

被引:12
|
作者
Blouin-Demers, G [1 ]
Gibbs, HL [1 ]
机构
[1] Ohio State Univ, Dept Ecol Evolut & Organismal Biol, Columbus, OH 43210 USA
来源
MOLECULAR ECOLOGY NOTES | 2003年 / 3卷 / 01期
关键词
black rat snake; DNA loci; Elaphe obsoleta; microsatellite;
D O I
10.1046/j.1471-8286.2003.00363.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We obtained molecular markers useful for population level studies of the black rat snake (Elaphe obsoleta) by screening genomic DNA libraries enriched for dinucleotide, tetranucleotide, and pentanucleotide microsatellite repeats. Following sequencing of the positive clones, 11 pairs of primers were designed for polymorphic loci and their variability assessed in > 350 individuals from four populations in North America. The loci had between 9 and 40 alleles and observed heterozygosities ranged from 0.071 to 0.87. Some of these pairs of primers also successfully amplified DNA from two other snake species.
引用
收藏
页码:98 / 99
页数:2
相关论文
共 50 条
  • [41] ISOLATION AND CHARACTERIZATION OF MICROSATELLITE LOCI IN SCHOENOPLECTUS JUNCOIDES (CYPERACEAE)
    Ohsako, Takanori
    Yamada, Yuko
    AMERICAN JOURNAL OF BOTANY, 2011, 98 (06) : E147 - E149
  • [42] Isolation and characterization of microsatellite loci in the beaver (Castor canadensis)
    Crawford, J.
    Liu, Z.
    Nelson, T.
    Nielsen, C.
    Bloomquist, C.
    MOLECULAR ECOLOGY RESOURCES, 2008, 8 (03) : 616 - 618
  • [43] Isolation and characterization of microsatellite loci in the tree fern Alsophila spinulosa
    Zhou, Yuan
    Chen, Guo-Pei
    Wang, Ting
    AMERICAN FERN JOURNAL, 2008, 98 (01) : 42 - 45
  • [44] Isolation and Characterization of Novel Polymorphic Microsatellite Loci in Hippophae rhamnoides
    Islam M.A.
    Sinha P.
    Sharma S.S.
    Negi M.S.
    Tripathi S.B.
    Proceedings of the National Academy of Sciences, India Section B: Biological Sciences, 2017, 87 (3) : 727 - 732
  • [45] ISOLATION AND CHARACTERIZATION OF 30 MICROSATELLITE LOCI FOR CUNNINGHAMIA LANCEOLATA (TAXODIACEAE)
    Wang, Si-Si
    Zhang, Yang
    Liu, De-Chen
    Sun, Xiao-Wei
    Wang, Rong
    Li, Yuan-Yuan
    APPLICATIONS IN PLANT SCIENCES, 2017, 5 (09):
  • [46] Isolation and characterization of microsatellite loci in the great bustard, Otis tarda
    Lieckfeldt, D
    Schmidt, A
    Pitra, C
    MOLECULAR ECOLOGY NOTES, 2001, 1 (03): : 133 - 134
  • [47] Isolation and characterization of microsatellite loci in the invasive Alliaria petiolata (Brassicaceae)
    Durka, W
    Bossdorf, O
    Gautschi, B
    MOLECULAR ECOLOGY NOTES, 2004, 4 (02): : 173 - 175
  • [48] Isolation and characterization of nuclear microsatellite loci in Pinus pinaster Ait
    Guevara, MA
    Chagné, D
    Almeida, MH
    Byrne, M
    Collada, C
    Favre, JM
    Harvengt, L
    Jeandroz, S
    Orazio, C
    Plomion, C
    Ramboer, A
    Rocheta, M
    Sebastiani, F
    Soto, A
    Vendramin, GG
    Cervera, MT
    MOLECULAR ECOLOGY NOTES, 2005, 5 (01): : 57 - 59
  • [49] Isolation and characterization of microsatellite loci in endangered Cycas changjiangensis (Cycadaceae)
    Li, Ling
    Wang, Zheng-Feng
    Jian, Shu-Guang
    Zhu, Peng
    Zhang, Min
    Ye, Wan-Hui
    Ren, Hai
    CONSERVATION GENETICS, 2009, 10 (03) : 793 - 795
  • [50] ISOLATION AND CHARACTERIZATION OF POLYMORPHIC MICROSATELLITE LOCI IN SELLIERA RADICANS (GOODENIACEAE)
    Pilkington, Kay M.
    Symonds, V. Vaughan
    APPLICATIONS IN PLANT SCIENCES, 2016, 4 (06):