The Ability of Microbial Community of Lake Baikal Bottom Sediments Associated with Gas Discharge to Carry Out the Transformation of Organic Matter under Thermobaric Conditions

被引:13
作者
Bukin, Sergei V. [1 ]
Pavlova, Olga N. [1 ]
Manakov, Andrei Y. [2 ]
Kostyreva, Elena A. [3 ]
Chernitsyna, Svetlana M. [1 ]
Mamaeva, Elena V. [1 ]
Pogodaeva, Tatyana V. [4 ]
Zemskaya, Tamara I. [1 ]
机构
[1] Russian Acad Sci, Lab Hydrocarbon Microbiol, Limnol Inst, Irkutsk 664003, Russia
[2] Russian Acad Sci, Nikolaev Inst Inorgan Chem, Lab Clathrate Cpds, Novosibirsk, Russia
[3] Russian Acad Sci, Trofimuk Inst Petr Geol & Geophys, Lab Petr Geochem, Novosibirsk, Russia
[4] Russian Acad Sci, Limnol Inst, Lab Hydrochem & Atmosphere Chem, Irkutsk 664003, Russia
基金
俄罗斯基础研究基金会;
关键词
subsurface biosphere; Lake Baikal; microbial community; methane; gammacerene; 16S RIBOSOMAL-RNA; DEEP SUBSEAFLOOR SEDIMENTS; SEA-FLOOR BIOSPHERE; SUBSURFACE SEDIMENTS; MARINE-SEDIMENTS; BACTERIAL COMMUNITY; AEROBIC-BACTERIA; PERU MARGIN; PORE WATERS; SP NOV;
D O I
10.3389/fmicb.2016.00690
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The ability to compare the composition and metabolic potential of microbial communities inhabiting the subsurface sediment in geographically distinct locations is one of the keys to understanding the evolution and function of the subsurface biosphere. Prospective areas for study of the subsurface biosphere are the sites of hydrocarbon discharges on the bottom of the Lake Baikal rift, where ascending fluxes of gas-saturated fluids and oil from deep layers of bottom sediments seep into near-surface sediment. The samples of surface sediments collected in the area of the Posolskaya Bank methane seep were cultured for 17 months under thermobaric conditions (80 degrees C, 5 MPa) with the addition of complementary organic substrate, and a different composition for the gas phase. After incubation, the presence of intact cells of microorganisms, organic matter transformation and the formation of oil biomarkers was confirmed in the samples, with the addition of Baikal diatom alga Synedra acus detritus, and gas mixture CH4:H-2:CO2. Taxonomic assignment of the 16S rRNA sequence data indicates that the predominant sequences in the enrichment were Sphingornonas (55.3%), Solirubrobacter (27.5%) and Arthrobacter (16.6%). At the same time, in heat-killed sediment and in sediment without any additional substrates, which were cultivated in a CH4 atmosphere, no geochemical changes were detected, nor the presence of intact cells and 16S rRNA sequences of Bacteria and Archaea. This data may suggest that the decomposition of organic matter under culturing conditions could be performed by microorganisms from low temperature sediment layers. One possible explanation of this phenomenon is migration of the representatives of the deep thermophilic community through fault zones in the near surface sediment layers, together with gas-bearing fluids.
引用
收藏
页数:12
相关论文
共 89 条
[1]   Taxonomic study of aromatic-degrading bacteria from deep-terrestrial-subsurface sediments and description of Sphingomonas aromaticivorans sp nov, Sphingomonas subterranea sp nov, and Sphingomonas stygia sp nov [J].
Balkwill, DL ;
Drake, GR ;
Reeves, RH ;
Fredrickson, JK ;
White, DC ;
Ringelberg, DB ;
Chandler, DP ;
Romine, MF ;
Kennedy, DW ;
Spadoni, CM .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1997, 47 (01) :191-201
[2]   A new Quaternary record of regional tectonic, sedimentation and paleoclimate changes from drill core BDP-99 at Posolskaya Bank, Lake Baikal [J].
Bezrukova, E ;
Bukharov, A ;
Bychinsky, V ;
Fedenya, S ;
Gelety, V ;
Goreglyad, A ;
Gorokhov, I ;
Gvozdkov, A ;
Ivanov, E ;
Kalmychkov, G ;
Kawai, T ;
Kerber, E ;
Khakhaev, B ;
Khomutova, M ;
Khursevich, G ;
Kochukov, V ;
Krainov, V ;
Kravchinsky, V ;
Kudryashov, N ;
Kulagina, N ;
Kuzmin, M ;
Letunova, P ;
Levina, O ;
Ochiai, S ;
Pevzner, L ;
Prokopenko, A ;
Solotchin, P ;
Tanaka, A ;
Tkachenko, L ;
Williams, D ;
Yamaguchi, J .
QUATERNARY INTERNATIONAL, 2005, 136 :105-121
[3]   Prospects for the study of evolution in the deep biosphere [J].
Biddle, Jennifer F. ;
Sylvan, Jason B. ;
Brazelton, William J. ;
Tully, Benjamin J. ;
Edwards, Katrina J. ;
Moyer, Craig L. ;
Heidelberg, John F. ;
Nelson, William C. .
FRONTIERS IN MICROBIOLOGY, 2012, 3
[4]  
Boetius A, 2013, NAT GEOSCI, V6, P725, DOI [10.1038/ngeo1926, 10.1038/NGEO1926]
[5]  
Bradbury J. Platt, 1994, Journal of Paleolimnology, V10, P213, DOI 10.1007/BF00684034
[6]   The deep biosphere in terrestrial sediments in the Chesapeake Bay area, Virginia, USA [J].
Breuker, Anja ;
Koeweker, Gerrit ;
Blazejak, Anna ;
Schippers, Axel .
FRONTIERS IN MICROBIOLOGY, 2011, 2
[7]  
Chang HW, 2007, J MICROBIOL BIOTECHN, V17, P1875
[8]  
Choi KK, 2004, J MICROBIOL BIOTECHN, V14, P1009
[9]   Microorganisms persist at record depths in the subseafloor of the Canterbury Basin (vol 8, pg 1370, 2014) [J].
Ciobanu, Maria-Cristina ;
Burgaud, Gaetan ;
Dufresne, Alexis ;
Breuker, Anja ;
Redou, Vanessa ;
Ben Maamar, Sarah ;
Gaboyer, Frederic ;
Vandenabeele-Trambouze, Odile ;
Lipp, Julius Sebastian ;
Schippers, Axel ;
Vandenkoornhuyse, Philippe ;
Barbier, Georges ;
Jebbar, Mohamed ;
Godfroy, Anne ;
Alain, Karine .
ISME JOURNAL, 2014, 8 (11) :2352-2352
[10]   Fluids from aging ocean crust that support microbial life [J].
Cowen, JP ;
Giovannoni, SJ ;
Kenig, F ;
Johnson, HP ;
Butterfield, D ;
Rappé, MS ;
Hutnak, M ;
Lam, P .
SCIENCE, 2003, 299 (5603) :120-123