Prognostic value of ferroptosis-related genes in patients with lung adenocarcinoma

被引:14
作者
Zhu, Guangsheng [1 ,2 ]
Huang, Hua [1 ,2 ]
Xu, Songlin [1 ,2 ]
Shi, Ruifeng [1 ,2 ]
Gao, Zhouyong [3 ]
Lei, Xi [1 ,2 ]
Zhu, Shuai [1 ,2 ]
Zhou, Ning [1 ,2 ]
Zu, Lingling [1 ,2 ]
Mello, Ramon A. De [4 ]
Chen, Jun [1 ,2 ]
Xu, Song [1 ,2 ]
机构
[1] Tianjin Med Univ, Dept Lung Canc Surg, Gen Hosp, Tianjin, Peoples R China
[2] Tianjin Med Univ, Lung Canc Inst, Tianjin Key Lab Lung Canc Metastasis & Tumor Micr, Gen Hosp, Tianjin, Peoples R China
[3] Tianjin Med Univ, Tianjin, Peoples R China
[4] Univ Fed Sao Paulo, Escola Paulista Med, Sao Paulo, Brazil
基金
中国国家自然科学基金;
关键词
ferroptosis; ferroptosis‐ related genes; LUAD; lung adenocarcinoma; CELL;
D O I
10.1111/1759-7714.13998
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background The prevalence of lung adenocarcinomas (LUADs) has dramatically increased in recent decades. Ferroptosis is a process of iron-dependent regulatory cell death. It is still unclear whether the expression of ferroptosis-related genes (FRGs) is involved in the pathogenesis and survival of patients with LUAD. Methods We retrieved LUAD data from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) databases and used LASSO Cox regression analysis to select the gene signature suitable for modeling. The risk score was calculated according to the model, and the patients were divided into high- and low-risk groups according to the median risk score. Functional enrichment analysis was carried out by this group, and a model for predicting clinical prognosis was established by combining this group with clinical factors. Results Gene set enrichment analysis (GSEA) and single-sample gene set enrichment analysis (ssGSEA) analysis showed that there were several immune-related pathways and immune infiltration differences between high- and low-risk groups. A prognostic model integrating 10 ferroptosis-related genes (FR-DEGs), and clinical factors were constructed and validated in an external cohort. Conclusions The FR-DEGs signature was related to immune infiltration, and a model based on FR-DEGs and clinical factors was established to predict the prognosis of patients with LUAD.
引用
收藏
页码:1890 / 1899
页数:10
相关论文
共 27 条
[1]   NFS1 undergoes positive selection in lung tumours and protects cells from ferroptosis [J].
Alvarez, Samantha W. ;
Sviderskiy, Vladislav O. ;
Terzi, Erdem M. ;
Papagiannakopoulos, Thales ;
Moreira, Andre L. ;
Adams, Sylvia ;
Sabatini, David M. ;
Birsoy, Kivanc ;
Possemato, Richard .
NATURE, 2017, 551 (7682) :639-+
[2]   Ferroptosis at the crossroads of cancer-acquired drug resistance and immune evasion [J].
Angeli, Jose Pedro Friedmann ;
Krysko, Dmitri, V ;
Conrad, Marcus .
NATURE REVIEWS CANCER, 2019, 19 (07) :405-414
[3]   Prominin-2 Suppresses Ferroptosis Sensitivity [J].
Belavgeni, Alexia ;
Bornstein, Stefan R. ;
Linkermann, Andreas .
DEVELOPMENTAL CELL, 2019, 51 (05) :548-549
[4]   Comprehensive molecular profiling of lung adenocarcinoma [J].
Collisson, Eric A. ;
Campbell, Joshua D. ;
Brooks, Angela N. ;
Berger, Alice H. ;
Lee, William ;
Chmielecki, Juliann ;
Beer, David G. ;
Cope, Leslie ;
Creighton, Chad J. ;
Danilova, Ludmila ;
Ding, Li ;
Getz, Gad ;
Hammerman, Peter S. ;
Hayes, D. Neil ;
Hernandez, Bryan ;
Herman, James G. ;
Heymach, John V. ;
Jurisica, Igor ;
Kucherlapati, Raju ;
Kwiatkowski, David ;
Ladanyi, Marc ;
Robertson, Gordon ;
Schultz, Nikolaus ;
Shen, Ronglai ;
Sinha, Rileen ;
Sougnez, Carrie ;
Tsao, Ming-Sound ;
Travis, William D. ;
Weinstein, John N. ;
Wigle, Dennis A. ;
Wilkerson, Matthew D. ;
Chu, Andy ;
Cherniack, Andrew D. ;
Hadjipanayis, Angela ;
Rosenberg, Mara ;
Weisenberger, Daniel J. ;
Laird, Peter W. ;
Radenbaugh, Amie ;
Ma, Singer ;
Stuart, Joshua M. ;
Byers, Lauren Averett ;
Baylin, Stephen B. ;
Govindan, Ramaswamy ;
Meyerson, Matthew ;
Rosenberg, Mara ;
Gabriel, Stacey B. ;
Cibulskis, Kristian ;
Sougnez, Carrie ;
Kim, Jaegil ;
Stewart, Chip .
NATURE, 2014, 511 (7511) :543-550
[5]   Human Haploid Cell Genetics Reveals Roles for Lipid Metabolism Genes in Nonapoptotic Cell Death [J].
Dixon, Scott J. ;
Winter, Georg E. ;
Musavi, Leila S. ;
Lee, Eric D. ;
Snijder, Berend ;
Rebsamen, Manuele ;
Superti-Furga, Giulio ;
Stockwell, Brent R. .
ACS CHEMICAL BIOLOGY, 2015, 10 (07) :1604-1609
[6]   Ferroptosis: An Iron-Dependent Form of Nonapoptotic Cell Death [J].
Dixon, Scott J. ;
Lemberg, Kathryn M. ;
Lamprecht, Michael R. ;
Skouta, Rachid ;
Zaitsev, Eleina M. ;
Gleason, Caroline E. ;
Patel, Darpan N. ;
Bauer, Andras J. ;
Cantley, Alexandra M. ;
Yang, Wan Seok ;
Morrison, Barclay, III ;
Stockwell, Brent R. .
CELL, 2012, 149 (05) :1060-1072
[7]   A ferroptosis-related gene signature predicts overall survival in patients with lung adenocarcinoma [J].
Gao, Xinliang ;
Tang, Mingbo ;
Tian, Suyan ;
Li, Jialin ;
Liu, Wei .
FUTURE ONCOLOGY, 2021, 17 (12) :1533-1544
[8]   Targeting Ferroptosis to Iron Out Cancer [J].
Hassannia, Behrouz ;
Vandenabeele, Peter ;
Vanden Berghe, Tom .
CANCER CELL, 2019, 35 (06) :830-849
[9]   Iron and lung cancer [J].
Kuang, Yanbin ;
Wang, Qi .
CANCER LETTERS, 2019, 464 :56-61
[10]   Recent Progress in Ferroptosis Inducers for Cancer Therapy [J].
Liang, Chen ;
Zhang, Xinglin ;
Yang, Mengsu ;
Dong, Xiaochen .
ADVANCED MATERIALS, 2019, 31 (51)