A growing toolbox of techniques for studying β-barrel outer membrane protein folding and biogenesis

被引:12
|
作者
Horne, Jim E. [1 ,2 ]
Radford, Sheena E. [1 ,2 ]
机构
[1] Univ Leeds, Astbury Ctr Struct Mol Biol, Leeds LS2 9JT, W Yorkshire, England
[2] Univ Leeds, Sch Mol & Cellular Biol, Leeds LS2 9JT, W Yorkshire, England
基金
英国生物技术与生命科学研究理事会;
关键词
beta-barrel; biogenesis; biophysical techniques; outer membrane protein; protein folding; CARBOXY-TERMINAL PHENYLALANINE; ESCHERICHIA-COLI; TRYPTOPHAN FLUORESCENCE; MASS-SPECTROMETRY; LIPID-BILAYERS; AMPHIPATHIC POLYMERS; TRANSITION-STATE; STABILITY; INSERTION; OMPA;
D O I
10.1042/BST20160020
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Great strides into understanding protein folding have been made since the seminal work of Anfinsen over 40 years ago, but progress in the study of membrane protein folding has lagged behind that of their water soluble counterparts. Researchers in these fields continue to turn to more advanced techniques such as NMR, mass spectrometry, molecular dynamics (MD) and singlemolecule methods to interrogate how proteins fold. Our understanding of beta-barrel outer membrane protein (OMP) folding has benefited from these advances in the last decade. This class of proteins must traverse the periplasm and then insert into an asymmetric lipid membrane in the absence of a chemical energy source. In this review we discuss old, new and emerging techniques used to examine the process of OMP folding and biogenesis in vitro and describe some of the insights and new questions these techniques have revealed.
引用
收藏
页码:802 / 809
页数:8
相关论文
共 50 条
  • [1] Membrane Defects Accelerate Outer Membrane β-Barrel Protein Folding
    Danoff, Emily J.
    Fleming, Karen G.
    BIOCHEMISTRY, 2015, 54 (02) : 97 - 99
  • [2] Outer membrane β-barrel protein folding is physically controlled by periplasmic lipid head groups and BamA
    Gessmann, Dennis
    Chung, Yong Hee
    Danoff, Emily J.
    Plummer, Ashlee M.
    Sandlin, Clifford W.
    Zaccai, Nathan R.
    Fleming, Karen G.
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 111 (16) : 5878 - 5883
  • [3] Biogenesis of β-barrel integral proteins of bacterial outer membrane
    Solov'eva, T. F.
    Novikova, O. D.
    Portnyagina, O. Yu.
    BIOCHEMISTRY-MOSCOW, 2012, 77 (11) : 1221 - 1236
  • [4] Folding of outer membrane protein A in the anionic biosurfactant rhamnolipid
    Andersen, Kell K.
    Otzen, Daniel E.
    FEBS LETTERS, 2014, 588 (10) : 1955 - 1960
  • [5] Structural insight into mitochondrial β-barrel outer membrane protein biogenesis
    Diederichs, Kathryn A.
    Ni, Xiaodan
    Rollauer, Sarah E.
    Botos, Istvan
    Tan, Xiaofeng
    King, Martin S.
    Kunji, Edmund R. S.
    Jiang, Jiansen
    Buchanan, Susan K.
    NATURE COMMUNICATIONS, 2020, 11 (01)
  • [6] Malleability of the Folding Mechanism of the Outer Membrane Protein PagP: Parallel Pathways and the Effect of Membrane Elasticity
    Huysmans, Gerard H. M.
    Radford, Sheena E.
    Baldwin, Stephen A.
    Brockwell, David J.
    JOURNAL OF MOLECULAR BIOLOGY, 2012, 416 (03) : 453 - 464
  • [7] Folding outer membrane proteins independently of the β-barrel assembly machinery: an assembly pathway for multimeric complexes?
    Huysmans, Gerard H. M.
    BIOCHEMICAL SOCIETY TRANSACTIONS, 2016, 44 : 845 - 850
  • [8] Concatemers of Outer Membrane Protein A Take Detours in the Folding Landscape
    Andersen, Kell K.
    Vad, Brian
    Omer, Sahar
    Otzen, Daniel E.
    BIOCHEMISTRY, 2016, 55 (51) : 7123 - 7140
  • [9] The transition state for folding of an outer membrane protein
    Huysmans, Gerard H. M.
    Baldwin, Stephen A.
    Brockwell, David J.
    Radford, Sheena E.
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (09) : 4099 - 4104
  • [10] Membrane protein folding on the example of outer membrane protein A of Escherichia coli
    Kleinschmidt, JH
    CELLULAR AND MOLECULAR LIFE SCIENCES, 2003, 60 (08) : 1547 - 1558