Profiling Total Viable Bacteria in a Hemodialysis Water Treatment System

被引:14
作者
Chen, Lihua [1 ,2 ]
Zhu, Xuan [3 ]
Zhang, Menglu [1 ]
Wang, Yuxin [3 ]
Lv, Tianyu [3 ]
Zhang, Shenghua [1 ]
Yu, Xin [1 ]
机构
[1] Chinese Acad Sci, Inst Urban Environm, Key Lab Urban Environm & Hlth, Xiamen 361021, Peoples R China
[2] Univ Chinese Acad Sci, Beijing 100049, Peoples R China
[3] 2 Hosp Xiamen, Dept Nephrol, Xiamen 361021, Peoples R China
基金
中国国家自然科学基金;
关键词
Dialysis water; viable bacteria; VBNC; PMA-qPCR; high-throughput sequencing; microbial community; ESCHERICHIA-COLI; IDENTIFICATION; RESUSCITATION; CONTAMINATION; INDUCTION; BIOFILMS; CELLS;
D O I
10.4014/jmb.1612.12002
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Culture-dependent methods, such as heterotrophic plate counting (HPC), are usually applied to evaluate the bacteriological quality of hemodialysis water. However, these methods cannot detect the uncultured or viable but non-culturable (VBNC) bacteria, both of which may be quantitatively predominant throughout the hemodialysis water treatment system. Therefore, propidium monoazide (PMA)-qPCR associated with HPC was used together to profile the distribution of the total viable bacteria in such a system. Moreover, high-throughput sequencing of 16S rRNA gene amplicons was utilized to analyze the microbial community structure and diversity. The HPC results indicated that the total bacterial counts conformed to the standards, yet the bacteria amounts were abruptly enhanced after carbon filter treatment. Nevertheless, the bacterial counts detected by PMA-qPCR, with the highest levels of 2.14 x 10(7) copies/100 ml in softener water, were much higher than the corresponding HPC results, which demonstrated the occurrence of numerous uncultured or VBNC bacteria among the entire system before reverse osmosis (RO). In addition, the microbial community structure was very different and the diversity was enhanced after the carbon filter. Although the diversity was minimized after RO treatment, pathogens such as Escherichia could still be detected in the RO effluent. In general, both the amounts of bacteria and the complexity of microbial community in the hemodialysis water treatment system revealed by molecular approaches were much higher than by traditional method. These results suggested the higher health risk potential for hemodialysis patients from the up-to-standard water. The treatment process could also be optimized, based on the results of this study.
引用
收藏
页码:995 / 1004
页数:10
相关论文
共 40 条
[1]  
Association for the Advancement of Medical Instrument (AAMI), 2008, RD62 AAMI ANSIAAMI
[2]   SYBRA®Green qPCR screening methods for the presence of "35S promoter" and "NOS terminator" elements in food and feed products [J].
Barbau-Piednoir, Elodie ;
Lievens, Antoon ;
Mbongolo-Mbella, Guillaume ;
Roosens, Nancy ;
Sneyers, Myriam ;
Leunda-Casi, Amaya ;
Van den Bulcke, Marc .
EUROPEAN FOOD RESEARCH AND TECHNOLOGY, 2010, 230 (03) :383-393
[3]   Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms [J].
Caporaso, J. Gregory ;
Lauber, Christian L. ;
Walters, William A. ;
Berg-Lyons, Donna ;
Huntley, James ;
Fierer, Noah ;
Owens, Sarah M. ;
Betley, Jason ;
Fraser, Louise ;
Bauer, Markus ;
Gormley, Niall ;
Gilbert, Jack A. ;
Smith, Geoff ;
Knight, Rob .
ISME JOURNAL, 2012, 6 (08) :1621-1624
[4]   QIIME allows analysis of high-throughput community sequencing data [J].
Caporaso, J. Gregory ;
Kuczynski, Justin ;
Stombaugh, Jesse ;
Bittinger, Kyle ;
Bushman, Frederic D. ;
Costello, Elizabeth K. ;
Fierer, Noah ;
Pena, Antonio Gonzalez ;
Goodrich, Julia K. ;
Gordon, Jeffrey I. ;
Huttley, Gavin A. ;
Kelley, Scott T. ;
Knights, Dan ;
Koenig, Jeremy E. ;
Ley, Ruth E. ;
Lozupone, Catherine A. ;
McDonald, Daniel ;
Muegge, Brian D. ;
Pirrung, Meg ;
Reeder, Jens ;
Sevinsky, Joel R. ;
Tumbaugh, Peter J. ;
Walters, William A. ;
Widmann, Jeremy ;
Yatsunenko, Tanya ;
Zaneveld, Jesse ;
Knight, Rob .
NATURE METHODS, 2010, 7 (05) :335-336
[5]  
Carter J, 1996, PDA J Pharm Sci Technol, V50, P147
[6]   Activation of Toll-like receptor 9 by DNA from different bacterial species [J].
Dalpke, A ;
Frank, J ;
Peter, M ;
Heeg, M .
INFECTION AND IMMUNITY, 2006, 74 (02) :940-946
[7]   High sensitivity pyrogen testing in water and dialysis solutions [J].
Daneshian, Mardas ;
Wendel, Albrecht ;
Hartung, Thomas ;
von Aulock, Sonja .
JOURNAL OF IMMUNOLOGICAL METHODS, 2008, 336 (01) :64-70
[8]   Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB [J].
DeSantis, T. Z. ;
Hugenholtz, P. ;
Larsen, N. ;
Rojas, M. ;
Brodie, E. L. ;
Keller, K. ;
Huber, T. ;
Dalevi, D. ;
Hu, P. ;
Andersen, G. L. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2006, 72 (07) :5069-5072
[9]   Extranasal Staphylococcus aureus colonization predisposes to bloodstream infections in patients on hemodialysis with noncuffed internal jugular vein catheters [J].
Devraj, Anand ;
Tez Pinnamaneni, Venkata Siva ;
Biswal, Manisha ;
Ramachandran, Raja ;
Jha, Vivekanand .
HEMODIALYSIS INTERNATIONAL, 2017, 21 (01) :35-40
[10]  
Ding Linxian, 2011, Weishengwu Xuebao, V51, P858