PAPILA: Dataset with fundus images and clinical data of both eyes of the same patient for glaucoma assessment

被引:51
作者
Kovalyk, Oleksandr [1 ]
Morales-Sanchez, Juan [1 ]
Verdu-Monedero, Rafael [1 ]
Selles-Navarro, Inmaculada [2 ]
Palazon-Cabanes, Ana [2 ]
Sancho-Gomez, Jose-Luis [1 ]
机构
[1] Univ Politecn Cartagena, Cartagena 30202, Spain
[2] Hosp Gen Univ Reina Sofia, Murcia 30003, Spain
关键词
OPTIC-NERVE; CLASSIFICATION; CUP; SEGMENTATION; RATIO; DISC;
D O I
10.1038/s41597-022-01388-1
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Glaucoma is one of the ophthalmological diseases that frequently causes loss of vision in today's society. Previous studies assess which anatomical parameters of the optic nerve can be predictive of glaucomatous damage, but to date there is no test that by itself has sufficient sensitivity and specificity to diagnose this disease. This work provides a public dataset with medical data and fundus images of both eyes of the same patient. Segmentations of the cup and optic disc, as well as the labeling of the patients based on the evaluation of clinical data are also provided. The dataset has been tested with a neural network to classify healthy and glaucoma patients. Specifically, the ResNet-50 has been used as the basis to classify patients using information from each eye independently as well as using the joint information from both eyes of each patient. Results provide the baseline metrics, with the aim of promoting research in the early detection of glaucoma based on the joint analysis of both eyes of the same patient.
引用
收藏
页数:12
相关论文
共 51 条
[1]  
Abramoff Michael D, 2010, IEEE Rev Biomed Eng, V3, P169, DOI 10.1109/RBME.2010.2084567
[2]   Retinal fundus images for glaucoma analysis: the RIGA dataset [J].
Almazroa, Ahmed ;
Alodhayb, Sami ;
Osman, Essameldin ;
Ramadan, Eslam ;
Hummadi, Mohammed ;
Dlaim, Mohammed ;
Alkatee, Muhannad ;
Raahemifar, Kaamran ;
Lakshminarayanan, Vasudevan .
MEDICAL IMAGING 2018: IMAGING INFORMATICS FOR HEALTHCARE, RESEARCH, AND APPLICATIONS, 2018, 10579
[3]   Optic Disc and Optic Cup Segmentation Methodologies for Glaucoma Image Detection: A Survey [J].
Almazroa, Ahmed ;
Burman, Ritambhar ;
Raahemifar, Kaamran ;
Lakshminarayanan, Vasudevan .
JOURNAL OF OPHTHALMOLOGY, 2015, 2015
[4]   CUP/DISC RATIO - FINDINGS OF TONOMETRY AND TONOGRAPHY IN NORMAL EYE [J].
ARMALY, MF ;
SAYEGH, RE .
ARCHIVES OF OPHTHALMOLOGY, 1969, 82 (02) :191-&
[5]   G1020: A Benchmark Retinal Fundus Image Dataset for Computer-Aided Glaucoma Detection [J].
Bajwa, Muhammad Naseer ;
Singh, Gur Amrit Pal ;
Neumeier, Wolfgang ;
Malik, Muhammad Imran ;
Dengel, Andreas ;
Ahmed, Sheraz .
2020 INTERNATIONAL JOINT CONFERENCE ON NEURAL NETWORKS (IJCNN), 2020,
[6]   Optic Disc Detection using Fine Tuned Convolutional Neural Networks [J].
Calimeri, Francesco ;
Marzullo, Aldo ;
Stamile, Claudio ;
Terracina, Giorgio .
2016 12TH INTERNATIONAL CONFERENCE ON SIGNAL-IMAGE TECHNOLOGY & INTERNET-BASED SYSTEMS (SITIS), 2016, :69-75
[7]   Identification of the optic nerve head with genetic algorithms [J].
Carmona, Enrique J. ;
Rincon, Mariano ;
Garcia-Feijoo, Julian ;
Martinez-de-la-Casa, Jose M. .
ARTIFICIAL INTELLIGENCE IN MEDICINE, 2008, 43 (03) :243-259
[8]   Definition of glaucoma: clinical and experimental concepts [J].
Casson, Robert J. ;
Chidlow, Glyn ;
Wood, John P. M. ;
Crowston, Jonathan G. ;
Goldberg, Ivan .
CLINICAL AND EXPERIMENTAL OPHTHALMOLOGY, 2012, 40 (04) :341-349
[9]   FEEDBACK ON A PUBLICLY DISTRIBUTED IMAGE DATABASE: THE MESSIDOR DATABASE [J].
Decenciere, Etienne ;
Zhang, Xiwei ;
Cazuguel, Guy ;
Lay, Bruno ;
Cochener, Beatrice ;
Trone, Caroline ;
Gain, Philippe ;
Ordonez-Varela, John-Richard ;
Massin, Pascale ;
Erginay, Ali ;
Charton, Beatrice ;
Klein, Jean-Claude .
IMAGE ANALYSIS & STEREOLOGY, 2014, 33 (03) :231-234
[10]  
Deng J, 2009, PROC CVPR IEEE, P248, DOI 10.1109/CVPRW.2009.5206848