Delivery of femtolitre droplets using surface acoustic wave based atomisation for cryo-EM grid preparation

被引:38
作者
Ashtiani, Dariush [1 ]
Venugopal, Hari [2 ]
Belousoff, Matthew [3 ]
Spicer, Bradley [4 ]
Mak, Johnson [5 ]
Neild, Adrian [1 ]
de Marco, Alex [4 ,6 ]
机构
[1] Monash Univ, Dept Mech & Aerosp Engn, Clayton, Vic, Australia
[2] Monash Univ, Ramaciotti Ctr Electron Microscopy, Clayton, Vic, Australia
[3] Monash Univ, Dept Microbiol, Clayton, Vic, Australia
[4] Monash Univ, Dept Biochem & Mol Biol, Clayton, Vic, Australia
[5] Griffith Univ, Inst Glyc, Gold Coast, Qld, Australia
[6] ARC Ctr Excellence Adv Mol Imaging, Clayton, Vic, Australia
基金
澳大利亚研究理事会;
关键词
Cryo-EM; Microfluidics; Blot-free sample preparation; Surface acoustic waves; Atomization; CRYOELECTRON MICROSCOPY; PARTICLE; SEPARATION; RIBOSOME; SAMPLES;
D O I
10.1016/j.jsb.2018.03.012
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Cryo-Electron Microscopy (cryo-EM) has become an invaluable tool for structural biology. Over the past decade, the advent of direct electron detectors and automated data acquisition has established cryo-EM as a central method in structural biology. However, challenges remain in the reliable and efficient preparation of samples in a manner which is compatible with high time resolution. The delivery of sample onto the grid is recognized as a critical step in the workflow as it is a source of variability and loss of material due to the blotting which is usually required. Here, we present a method for sample delivery and plunge freezing based on the use of Surface Acoustic Waves to deploy 6-8 mu m droplets to the EM grid. This method minimises the sample dead volume and ensures vitrification within 52.6 ms from the moment the sample leaves the microfluidics chip. We demonstrate a working protocol to minimize the atomised volume and apply it to plunge freeze three different samples and provide proof that no damage occurs due to the interaction between the sample and the acoustic waves.
引用
收藏
页码:94 / 101
页数:8
相关论文
共 51 条
[1]   Blotting-free and lossless cryo-electron microscopy grid preparation from nanoliter-sized protein samples and single-cell extracts [J].
Arnold, Stefan A. ;
Albiez, Stefan ;
Bieri, Andrej ;
Syntychaki, Anastasia ;
Adaixo, Ricardo ;
McLeod, Robert A. ;
Goldie, Kenneth N. ;
Stahlberg, Henning ;
Braun, Thomas .
JOURNAL OF STRUCTURAL BIOLOGY, 2017, 197 (03) :220-226
[2]   Total Sample Conditioning and Preparation of Nanoliter Volumes for Electron Microscopy [J].
Arnold, Stefan A. ;
Albiez, Stefan ;
Opara, Nadia ;
Chami, Mohamed ;
Schmidli, Claudio ;
Bieri, Andrej ;
Padeste, Celestino ;
Stahlberg, Henning ;
Braun, Thomas .
ACS NANO, 2016, 10 (05) :4981-4988
[3]  
Bartholomeusz DA, 2005, J MICROELECTROMECH S, V14, P1364, DOI 10.1109/JMEMS.2005.859087
[4]   Structural Dynamics of Ribosome Subunit Association Studied by Mixing-Spraying Time-Resolved Cryogenic Electron Microscopy [J].
Chen, Bo ;
Kaledhonkar, Sandip ;
Sun, Ming ;
Shen, Bingxin ;
Lu, Zonghuan ;
Barnard, David ;
Lu, Toh-Ming ;
Gonzalez, Ruben L., Jr. ;
Frank, Joachim .
STRUCTURE, 2015, 23 (06) :1097-1105
[5]   A method to achieve homogeneous dispersion of large transmembrane complexes within the holes of carbon films for electron cryomicroscopy [J].
Cheung, Martin ;
Kajimura, Naoko ;
Makino, Fumiaki ;
Ashihara, Masamichi ;
Miyata, Tomoko ;
Kato, Takayuki ;
Namba, Keiichi ;
Blocker, Ariel J. .
JOURNAL OF STRUCTURAL BIOLOGY, 2013, 182 (01) :51-56
[6]  
Chono K., 2004, JPN J APPL PHYS, V43
[7]   Continuous micro-vortex-based nanoparticle manipulation via focused surface acoustic waves [J].
Collins, David J. ;
Ma, Zhichao ;
Han, Jongyoon ;
Ai, Ye .
LAB ON A CHIP, 2017, 17 (01) :91-103
[8]   Two-dimensional single-cell patterning with one cell per well driven by surface acoustic waves [J].
Collins, David J. ;
Morahan, Belinda ;
Garcia-Bustos, Jose ;
Doerig, Christian ;
Plebanski, Magdalena ;
Neild, Adrian .
NATURE COMMUNICATIONS, 2015, 6
[9]   Particle separation using virtual deterministic lateral displacement (vDLD) [J].
Collins, David J. ;
Alan, Tuncay ;
Neild, Adrian .
LAB ON A CHIP, 2014, 14 (09) :1595-1603
[10]   Atomization off thin water films generated by high-frequency substrate wave vibrations [J].
Collins, David J. ;
Manor, Ofer ;
Winkler, Andreas ;
Schmidt, Hagen ;
Friend, James R. ;
Yeo, Leslie Y. .
PHYSICAL REVIEW E, 2012, 86 (05)