A chemical probe of CARM1 alters epigenetic plasticity against breast cancer cell invasion

被引:40
作者
Cai, Xiao-Chuan [1 ]
Zhang, Tuo [2 ]
Kim, Eui-jun [3 ]
Jiang, Ming [1 ,4 ]
Wang, Ke [1 ]
Wang, Junyi [1 ]
Chen, Shi [1 ,5 ]
Zhang, Nawei [1 ,6 ]
Wu, Hong [7 ]
Li, Fengling [7 ]
dela Sena, Carlo C. [7 ]
Zeng, Hong [7 ]
Vivcharuk, Victor [8 ]
Niu, Xiang [9 ,10 ]
Zheng, Weihong [1 ]
Lee, Jonghan P. [1 ,5 ]
Chen, Yuling [11 ]
Barsyte, Dalia [7 ]
Szewczyk, Magda [7 ]
Hajian, Taraneh [7 ]
Ibanez, Glorymar [1 ]
Dong, Aiping [7 ]
Dombrovski, Ludmila [7 ]
Zhang, Zhenyu [6 ]
Deng, Haiteng [7 ,11 ]
Min, Jinrong [7 ,12 ]
Arrowsmith, Cheryl H. [7 ,13 ]
Mazutis, Linas [9 ]
Shi, Lei [8 ]
Vedadi, Masoud [7 ,14 ]
Brown, Peter J. [7 ]
Xiang, Jenny [2 ]
Qin, Li-Xuan [15 ]
Xu, Wei [3 ]
Luo, Minkui [1 ,4 ]
机构
[1] Mem Sloan Kettering Canc Ctr, Chem Biol Program, 1275 York Ave, New York, NY 10021 USA
[2] Cornell Univ, Genom Resources Core Facil, Weill Cornell Med Coll, New York, NY 10021 USA
[3] Univ Wisconsin, McArdle Lab Canc Res, Madison, WI 53706 USA
[4] Cornell Univ, Program Pharmacol, Weill Cornell Med Coll, New York, NY 10021 USA
[5] Mem Sloan Kettering Canc Ctr, Triinst PhD Program Chem Biol, 1275 York Ave, New York, NY 10021 USA
[6] Capital Med Univ, Affiliat Hosp, Chaoyang Hosp, Dept Obstet & Gynecol, Beijing, Peoples R China
[7] Univ Toronto, Struct Genom Consortium, Toronto, ON, Canada
[8] Cornell Univ, Weill Cornell Med Coll, Dept Physiol & Biophys, New York, NY 10021 USA
[9] Mem Sloan Kettering Canc Ctr, Computat & Syst Biol Program, 1275 York Ave, New York, NY 10021 USA
[10] Mem Sloan Kettering Canc Ctr, Triinst PhD Program Computat Biol & Med, 1275 York Ave, New York, NY 10021 USA
[11] Tsinghua Univ, Sch Life Sci, Ctr Synthet & Systemat Biol, Beijing, Peoples R China
[12] Univ Toronto, Dept Physiol, Toronto, ON, Canada
[13] Univ Toronto, Dept Med Biophys, Princess Margaret Canc Ctr, Toronto, ON, Canada
[14] Univ Toronto, Dept Pharmacol & Toxicol, Toronto, ON, Canada
[15] Mem Sloan Kettering Canc Ctr, Dept Epidemiol & Biostat, New York, NY 10021 USA
基金
美国国家卫生研究院;
关键词
STRUCTURAL BASIS; SELECTIVE INHIBITOR; METHYLTRANSFERASE; ASSAY; METHYLATION; COMPLEX; DRUG; EZH2; REFINEMENT; LEUKEMIA;
D O I
10.7554/eLife.47110
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
CARM1 is a cancer-relevant protein arginine methyltransferase that regulates many aspects of transcription. Its pharmacological inhibition is a promising anti-cancer strategy. Here SKI-73 (6a in this work) is presented as a CARM1 chemical probe with pro-drug properties. SKI-73 (6a) can rapidly penetrate cell membranes and then be processed into active inhibitors, which are retained intracellularly with 10-fold enrichment for several days. These compounds were characterized for their potency, selectivity, modes of action, and on-target engagement. SKI-73 (6a) recapitulates the effect of CARM1 knockout against breast cancer cell invasion. Single-cell RNA-seq analysis revealed that the SKI-73(6a)-associated reduction of invasiveness acts by altering epigenetic plasticity and suppressing the invasion-prone subpopulation. Interestingly, SKI-73 (6a) and CARM1 knockout alter the epigenetic plasticity with remarkable difference, suggesting distinct modes of action for small-molecule and genetic perturbations. We therefore discovered a CARM1-addiction mechanism of cancer metastasis and developed a chemical probe to target this process.
引用
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页数:42
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