Mitochondrial DNA diversity and the population genetic structure of contemporary roe deer (Capreolus capreolus) in Europe

被引：5

作者：

Plis, Kamila ^{[1
]}

Niedzialkowska, Magdalena ^{[1
]}

Borowik, Tomasz ^{[1
]}

Lang, Johannes ^{[2
]}

Heddergott, Mike ^{[3
]}

Tiainen, Juha ^{[4
,5
]}

Bunevich, Aleksey ^{[6
]}

Sprem, Nikica ^{[7
]}

Paule, Ladislav ^{[8
]}

Danilkin, Aleksey ^{[9
]}

Kholodova, Marina ^{[9
]}

Zvychaynaya, Elena ^{[9
]}

Kashinina, Nadezhda ^{[9
]}

Pokorny, Bostjan ^{[10
,11
]}

Flajsman, Katarina ^{[11
]}

Paulauskas, Algimantas ^{[12
]}

Djan, Mihajla ^{[13
]}

Ristic, Zoran ^{[14
]}

Novak, Lubos ^{[15
]}

Kusza, Szilvia ^{[16
]}

Miller, Christine ^{[17
]}

Tsaparis, Dimitris ^{[18
]}

Stoyanov, Stoyan ^{[19
]}

Shkvyria, Maryna ^{[20
]}

Suchentrunk, Franz ^{[21
]}

Kutal, Miroslav ^{[22
]}

Lavadinovic, Vukan ^{[23
]}

Snjegota, Dragana ^{[24
]}

Krapal, Ana-Maria ^{[25
]}

Danila, Gabriel ^{[26
]}

Veeroja, Rauno ^{[27
]}

Dulko, Elzbieta ^{[28
,29
]}

Jedrzejewska, Bogumila ^{[1
]}

机构：

[1] Polish Acad Sci, Mammal Res Inst, Stoczek 1, PL-17230 Bialowieza, Poland

[2] Justus Liebig Univ Giessen, Working Grp Wildlife Res Clin Birds Stoczek 1 17, Frankfurter Str 108, D-35392 Giessen, Germany

[3] Musee Natl Hist Nat, Dept Zool, Rue Munster 25, L-2160 Luxembourg, Luxembourg

[4] Univ Helsinki, Lammi Biol Stn, Paajarventie 320, Lammi 16900, Finland

[5] Nat Resources Inst Finland Luke, Latokartanonkaari 9, Helsinki 00790, Finland

[6] State Natl Pk Belovezhskaya Pushcha, Kamenyuki 225063, BELARUS

[7] Univ Zagreb, Fac Agr, Dept Fisheries Apiculture Wildlife Management & S, Svetosimunska Cesta 25, Zagreb 10000, Croatia

[8] Tech Univ Zvolen, Dept Phytol, TG Masaryka 24, Zvolen 96001, Slovakia

[9] Russian Acad Sci, AN Severtsov Inst Ecol & Evolut, Leninskij Prosp 33, Moscow 119071, Russia

[10] Fac Environm Protect, Trg Mladosti 7, Velenje 3320, Slovenia

[11] Slovenian Forestry Inst, Dept Forest Ecol, Vecna Pot 2, Ljubljana 1000, Slovenia

[12] Vytautas Magnus Univ, Dept Biol, Vileikos G 8-802, LT-44404 Kaunas, Lithuania

[13] Univ Novi Sad, Fac Sci, Dept Biol & Ecol, Trg Dositeja Obradovica 2, Novi Sad 21000, Serbia

[14] Univ Novi Sad, Fac Sci, Dept Geog Tourism & Hotel Management, Trg Dositeja Obradovica 3, Novi Sad 21102, Serbia

[15] Mendel Univ Brno, Dept Forest Protect & Wildlife Management, Zemedelska 3, Brno 61300, Czech Republic

[16] Univ Debrecen, Ctr Agr Genom & Biotechnol, Egyet Ter 1, H-4032 Debrecen, Hungary

[17] Bur Wildlife Biol Bavaria, Haslau 21, D-83700 Rottach Egern, Germany

[18] Hellen Ctr Marine Res, Inst Marine Biol Biotechnol & Aquaculture IMBBC, POB 2214, Iraklion 71003, Crete, Greece

[19] Univ Forestry, Wildlife Management Dept, 10 Kliment Ohridski Blvd, Sofia 1797, Bulgaria

[20] Kyiv Zool Pk Natl Importance, Peremohy Ave 32, UA-04116 Kiev, Ukraine

[21] Univ Vet Med Vienna, Res Inst Wildlife Ecol, Savoyenstr 1, A-1160 Vienna, Austria

[22] Mendel Univ Brno, Fac Forestry & Wood Technol, Dept Forest Ecol, Zemedeska 3, Brno 61300, Czech Republic

[23] Univ Belgrade, Fac Forestry, Kneza Viseslava 1, Belgrade 11030, Serbia

[24] Univ Banja Luka, Fac Nat Sci & Math, Mladena Stojanovica 2, Banja Luka 78000, Bosnia & Herceg

[25] Grigore Antipa Natl Museum Nat Hist, Soseaua Pavel D Kiseleff 1, Bucharest 011341, Romania

[26] Stefan Cel Mare Univ Suceava, Fac Forestry, Str Univ 13, Suceava 720229, Romania

[27] Estonian Environm Agcy, Dept Wildlife Monitoring, Mustamae Tee 33, EE-10616 Tallinn, Estonia

[28] Univ Virginia Hlth Syst, Dept Anesthesiol, 1 Hosp Dr 4748, Charlottesville, VA 22908 USA

[29] Univ Warsaw, Fac Biol, Miecznikowa 1, PL-02096 Warsaw, Poland

来源：

MAMMALIAN BIOLOGY | 2022年 / 102卷 / 5-6期

关键词：

European roe deer; Introgression; Diversity; mtDNA; Control region; B GENE; PHYLOGEOGRAPHY; VARIABILITY; CONSERVATION; ADMIXTURE; PATTERNS; MTDNA; SHAPE;

D O I：

10.1007/s42991-022-00274-y

中图分类号：

Q95 [动物学];

学科分类号：

071002 ;

摘要：

The European roe deer (Capreolus capreolus) is one of the most numerous and widespread ungulate species in Europe, which has complicated the assessment of its genetic diversity on a range-wide scale. In this study, we present the mitochondrial DNA control region (mtDNA CR) genetic diversity and population structure of roe deer in Europe based on the analyses of 3010 samples, which were described as European roe deer individuals. Our analyses revealed two main diversity hotspots, namely Eastern and Central Europe. We proposed that these hotspots result from the Siberian roe deer (C.pygargus) mtDNA introgression and the secondary contact of mtDNA clades, respectively. Significantly lower values of genetic diversity (nucleotide and haplotype diversity) were recorded in the peripheral areas of the species' range, including the southernmost parts of the Last Glacial Maximum (LGM) refugial areas. Roe deer population in Europe consists of 2-3 genetic groups according to SAMOVA, and 15-16 clusters identified by GENELAND. The main driver of roe deer population structure in the eastern parts of the continent has been introgression of mtDNA of C. pygargus. Spatial genetic analyses revealed a complex structure of roe deer on a pan-European scale, which presumably results from post-glacial recolonization of the continent from various parts of a large LGM refugial area by different roe deer mtDNA clades and haplogroups.

引用

页码：1743 / 1754

页数：12

共 54 条

[1] Influence of Holocene environmental change and anthropogenic impact on the diversity and distribution of roe deer [J].

Baker, K. H. ;

Hoelzel, A. R. .

HEREDITY, 2014, 112 (06) :607-615

[2] Evolution of population genetic structure of the British roe deer by natural and anthropogenic processes (Capreolus capreolus) [J].

Baker, Karis H. ;

Hoelzel, A. Rus .

ECOLOGY AND EVOLUTION, 2013, 3 (01) :89-102

[3] The Multiple Origins of Roe Deer Populations in Western Iberia and Their Relevance for Conservation [J].

Barros, Tania ;

Ferreira, Eduardo ;

Gomes Rocha, Rita ;

Brotas, Goncalo ;

Carranza, Juan ;

Fonseca, Carlos ;

Tinoco Torres, Rita .

ANIMALS, 2020, 10 (12) :1-17

[4] Patterns of genetic admixture between roe deer of different origin in central Italy [J].

Biosa, Daniela ;

Scandura, Massimo ;

Tagliavini, James ;

Luccarini, Siriano ;

Mattioli, Luca ;

Apollonio, Marco .

JOURNAL OF MAMMALOGY, 2015, 96 (04) :827-838

[5] Neutral and Selective Processes Shape MHC Diversity in Roe Deer in Slovenia [J].

Buzan, Elena ;

Potusek, Sandra ;

Dunis, Luka ;

Pokorny, Bostjan .

ANIMALS, 2022, 12 (06)

[6] First Insights into the Population Genetic Structure and Heterozygosity-Fitness Relationship in Roe Deer Inhabiting the Area between the Alps and Dinaric Mountains [J].

Buzan, Elena ;

Geric, Urska ;

Potusek, Sandra ;

Flajsman, Katarina ;

Pokorny, Bostjan .

ANIMALS, 2020, 10 (12) :1-25

[7] DEVELOPMENTS IN THE PREDICTION OF EFFECTIVE POPULATION-SIZE [J].

CABALLERO, A .

HEREDITY, 1994, 73 :657-679

[8]

Clark AG., 2001, Encyclopedia of genetics, P1513, DOI DOI 10.1006/RWGN.2001.1016

[9] The Last Glacial Maximum [J].

Clark, Peter U. ;

Dyke, Arthur S. ;

Shakun, Jeremy D. ;

Carlson, Anders E. ;

Clark, Jorie ;

Wohlfarth, Barbara ;

Mitrovica, Jerry X. ;

Hostetler, Steven W. ;

McCabe, A. Marshall .

SCIENCE, 2009, 325 (5941) :710-714

[10] Genetic structure is influenced by landscape features: empirical evidence from a roe deer population [J].

Coulon, A ;

Guillot, G ;

Cosson, JF ;

Angibault, JMA ;

Aulagnier, S ;

Cargnelutti, B ;

Galan, M ;

Hewison, AJM .

MOLECULAR ECOLOGY, 2006, 15 (06) :1669-1679

← 1 2 3 4 5 6 →