The pyroptosis-related gene signature predicts prognosis and indicates the immune microenvironment status of chronic lymphocytic leukemia

被引:2
|
作者
Sha, Yeqin [1 ,2 ,3 ]
Jiang, Rui [1 ,2 ,3 ]
Miao, Yi [1 ,2 ,3 ]
Qin, Shuchao [1 ,2 ,3 ]
Wu, Wei [1 ,2 ,3 ]
Xia, Yi [1 ,2 ,3 ]
Wang, Li [1 ,2 ,3 ]
Fan, Lei [1 ,2 ,3 ]
Jin, Hui [1 ,2 ,3 ]
Xu, Wei [1 ,2 ,3 ]
Li, Jianyong [1 ,2 ,3 ,4 ]
Zhu, Huayuan [1 ,2 ,3 ]
机构
[1] Nanjing Med Univ, Jiangsu Prov Hosp, Dept Hematol, Affiliated Hosp 1, Nanjing, Peoples R China
[2] Pukou Div Jiangsu Prov Hosp, Pukou Chron Lymphocyt Leukemia CLL Ctr, Nanjing, Peoples R China
[3] Nanjing Med Univ, Collaborat Innovat Ctr Personalized Canc Med, Jiangsu Key Lab Canc Biomarkers Prevent & Treatmen, Nanjing, Peoples R China
[4] Soochow Univ, Natl Clin Res Ctr Hematol Dis, Affiliated Hosp 1, Suzhou, Peoples R China
来源
FRONTIERS IN IMMUNOLOGY | 2022年 / 13卷
基金
美国国家科学基金会; 中国国家自然科学基金;
关键词
Chronic lymphocytic leukemia; pyroptosis; prognosis; immune microenvironment; gene; INDUCE PYROPTOSIS; CLL; INFLAMMASOME; METHYLATION; VENETOCLAX; CISPLATIN; DIAGNOSIS; CASPASES; CLEAVAGE; CELLS;
D O I
10.3389/fimmu.2022.939978
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
Chronic lymphocytic leukemia (CLL) is the most common leukemia in the Western world with great heterogeneity. Pyroptosis has recently been recognized as an inflammatory form of programmed cell death (PCD) and shares a close relationship with apoptosis. Although the role of apoptosis in CLL was comprehensively studied and successfully applied in clinical treatment, the relationship between pyroptosis genes and CLL remained largely unknown. In this study, eight differentially expressed pyroptosis-related genes (PRGs) were identified between CLL and normal B cells. In order to screen out the prognostic value of differentially expressed PRGs, univariate and multivariate Cox regression analyses were conducted and a risk model with three PRG signatures (GSDME, NLRP3, and PLCG1) was constructed. All CLL samples were stratified into high- and low-risk subgroups according to risk scores. The risk model showed high efficacy in predicting both overall survival (OS) and time to first treatment (TTFT). Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and Gene Set Enrichment Analysis (GSEA) showed the dysregulation of immune and inflammatory response in the high-risk group. Single-sample GSEA (ssGSEA) of immune cell infiltration and the activity of immune-related pathways also displayed decreased antitumor immunity in the high-risk group. In conclusion, PRGs are of prognostic value in CLL and may play important roles in tumor immunity, and the underlying relationship between PRGs and CLL needs to be explored further.
引用
收藏
页数:13
相关论文
共 50 条
  • [11] A Pyroptosis-Related Gene Signature Predicts Prognosis and Tumor Immune Microenvironment in Colorectal Cancer
    Li, Linjing
    Li, Yuyi
    Lin, Junyi
    Pang, Wenjing
    TECHNOLOGY IN CANCER RESEARCH & TREATMENT, 2024, 23
  • [12] A pyroptosis-related gene signature that predicts immune infiltration and prognosis in colon cancer
    Wu, Mingjian
    Hao, Shuai
    Wang, Xiaoxiang
    Su, Shuguang
    Du, Siyuan
    Zhou, Sitong
    Yang, Ronghua
    Du, Hanpeng
    FRONTIERS IN ONCOLOGY, 2023, 13
  • [13] A novel pyroptosis-related LncRNA signature predicts prognosis and indicates tumor immune microenvironment in skin cutaneous melanoma
    Zhong, Jia'nan
    Wang, Zheng
    Hounye, Alphonse Houssou
    Liu, Jing
    Zhang, Jianglin
    Qi, Min
    LIFE SCIENCES, 2022, 307
  • [14] The pyroptosis-related signature predicts prognosis and influences the tumor immune microenvironment in dedifferentiated liposarcoma
    Chen, Wenjing
    Cheng, Jun
    Cai, Yiqi
    Wang, Pengfei
    Jin, Jinji
    OPEN MEDICINE, 2024, 19 (01):
  • [15] Two Pyroptosis-Related Subtypes with Distinct Immune Microenvironment Characteristics and a Novel Signature for Predicting Immunotherapy Response and Prognosis in Uveal Melanoma
    Lei, Shizhen
    Li, Haihui
    CURRENT EYE RESEARCH, 2022, 47 (06) : 930 - 943
  • [16] A Novel Pyroptosis-Related Signature for Predicting Prognosis and Indicating Immune Microenvironment Features in Osteosarcoma
    Zhang, Yiming
    He, Rong
    Lei, Xuan
    Mao, Lianghao
    Jiang, Pan
    Ni, Chenlie
    Yin, Zhengyu
    Zhong, Xinyu
    Chen, Chen
    Zheng, Qiping
    Li, Dapeng
    FRONTIERS IN GENETICS, 2021, 12
  • [17] A pyroptosis-related gene expression signature predicts immune microenvironment and prognosis in head and neck squamous cell carcinoma
    Zhou, Wenyuan
    Feng, Mei
    Qi, Fei
    Qiao, Jiao
    Fan, Lina
    Zhang, Long
    Hu, Xuegang
    Huang, Chunyu
    EUROPEAN ARCHIVES OF OTO-RHINO-LARYNGOLOGY, 2024, 281 (02) : 953 - 963
  • [18] A pyroptosis-related gene expression signature predicts immune microenvironment and prognosis in head and neck squamous cell carcinoma
    Wenyuan Zhou
    Mei Feng
    Fei Qi
    Jiao Qiao
    Lina Fan
    Long Zhang
    Xuegang Hu
    Chunyu Huang
    European Archives of Oto-Rhino-Laryngology, 2024, 281 : 953 - 963
  • [19] Pyroptosis-Related Gene Signature Predicts the Prognosis and Immune Infiltration in Neuroblastoma
    Li, Wanrong
    Li, Xin
    Xia, Yuren
    Wang, Jian
    FRONTIERS IN GENETICS, 2022, 13
  • [20] The Pyroptosis-Related Gene Signature Predicts the Prognosis of Hepatocellular Carcinoma
    Zhang, Shuqiao
    Li, Xinyu
    Zhang, Xiang
    Zhang, Shijun
    Tang, Chunzhi
    Kuang, Weihong
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2022, 8