Recognizing lung cancer and stages using a self-developed electronic nose system

被引:49
作者
Chen, Ke [1 ,5 ]
Liu, Lei [1 ]
Nie, Bo [1 ]
Lu, Binchun [2 ]
Fu, Lidan [2 ]
He, Zichun [3 ]
Li, Wang [4 ]
Pi, Xitian [1 ]
Liu, Hongying [1 ]
机构
[1] Chongqing Univ, Coll Bioengn, Minist Educ, Key Lab Biotechnol Sci & Technol, Chongqing, Peoples R China
[2] Chongqing Univ, Chongqing Univ Cincinnati Joint Co Op Inst, Chongqing, Peoples R China
[3] Chongqing Red Cross Hosp, Chongqing, Peoples R China
[4] Chongqing Univ Technol, Sch Pharm & Bioengn, Chongqing, Peoples R China
[5] Xinxiang Med Coll, Affiliated Hosp 1, Xinxiang, Henan, Peoples R China
基金
中国国家自然科学基金;
关键词
Lung cancer; Electronic nose; Volatile organic compounds; Kernel principal component analysis; Extreme gradient boosting; POSITRON-EMISSION-TOMOGRAPHY;
D O I
10.1016/j.compbiomed.2021.104294
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Exhaled breath contains thousands of gaseous volatile organic compounds (VOCs) that could be used as noninvasive biomarkers of lung cancer. Breath-based lung cancer screening has attracted wide attention on account of its convenience, low cost and easy popularization. In this paper, the research of lung cancer detection and staging is conducted by the self-developed electronic nose (e-nose) system. In order to investigate the performance of the device in distinguishing lung cancer patients from healthy controls, two feature extraction methods and two different classification models were adopted. Among all the models, kernel principal component analysis (KPCA) combined with extreme gradient boosting (XGBoost) achieved the best results among 235 breath samples. The accuracy, sensitivity and specificity of e-nose system were 93.59%, 95.60% and 91.09%, respectively. Meanwhile, the device could innovatively classify stages of 90 lung cancer patients (i.e., 44 stage III and 46 stage IV). Experimental results indicated that the recognition accuracy of lung cancer stages was more than 80%. Further experiments of this research also showed that the combination of sensor array and pattern recognition algorithms could identify and distinguish the expiratory characteristics of lung cancer, smoking and other respiratory diseases.
引用
收藏
页数:9
相关论文
共 54 条
[31]   Analysis of volatile organic compounds in the exhaled breath for the diagnosis of lung cancer [J].
Mazzone, Peter J. .
JOURNAL OF THORACIC ONCOLOGY, 2008, 3 (07) :774-780
[32]   Lung Cancer Screening with Computer Aided Detection Chest Radiography: Design and Results of a Randomized, Controlled Trial [J].
Mazzone, Peter J. ;
Obuchowski, Nancy ;
Phillips, Michael ;
Risius, Barbara ;
Bazerbashi, Bana ;
Meziane, Moulay .
PLOS ONE, 2013, 8 (03)
[33]  
McGuire S, 2014, ADV NUTR, V5, P456, DOI [10.3945/an.114.006171, 10.3945/an.116.012211]
[34]  
Okabe N., 2017, ANAL VOLATILE ORGANI
[35]   Preoperative staging of non-small-cell lung cancer with positron-emission tomography. [J].
Pieterman, RM ;
van Putten, JWG ;
Meuzelaar, JJ ;
Mooyaart, EL ;
Vaalburg, W ;
Koëter, GH ;
Fidler, V ;
Pruim, J ;
Groen, HJM .
NEW ENGLAND JOURNAL OF MEDICINE, 2000, 343 (04) :254-261
[36]   Searching for selected VOCs in human breath samples as potential markers of lung cancer [J].
Rudnicka, Joanna ;
Kowalkowski, Tomasz ;
Buszewski, Boguslaw .
LUNG CANCER, 2019, 135 :123-129
[37]   Diagnosis by Volatile Organic Compounds in Exhaled Breath from Lung Cancer Patients Using Support Vector Machine Algorithm [J].
Sakumura, Yuichi ;
Koyama, Yutaro ;
Tokutake, Hiroaki ;
Hida, Toyoaki ;
Sato, Kazuo ;
Itoh, Toshio ;
Akamatsu, Takafumi ;
Shin, Woosuck .
SENSORS, 2017, 17 (02)
[38]   Nonlinear component analysis as a kernel eigenvalue problem [J].
Scholkopf, B ;
Smola, A ;
Muller, KR .
NEURAL COMPUTATION, 1998, 10 (05) :1299-1319
[39]   Detection of Lung Cancer and EGFR Mutation by Electronic Nose System [J].
Shlomi, Dekel ;
Abud, Manal ;
Liran, Ori ;
Bar, Jair ;
Gai-Mor, Naomi ;
Ilouze, Maya ;
Onn, Amir ;
Ben-Nun, Alon ;
Haick, Hossam ;
Peled, Nir .
JOURNAL OF THORACIC ONCOLOGY, 2017, 12 (10) :1544-1551
[40]   Methods for Staging Non-small Cell Lung Cancer Diagnosis and Management of Lung Cancer, 3rd ed: American College of Chest Physicians Evidence-Based Clinical Practice Guidelines [J].
Silvestri, Gerard A. ;
Gonzalez, Anne V. ;
Jantz, Michael A. ;
Margolis, Mitchell L. ;
Gould, Michael K. ;
Tanoue, Lynn T. ;
Harris, Loren J. ;
Detterbeck, Frank C. .
CHEST, 2013, 143 (05) :E211-E250