Genetic Landscape of Somatic Mutations in a Large Cohort of Sporadic Medullary Thyroid Carcinomas Studied by Next-Generation Targeted Sequencing

被引:144
作者
Ciampi, Raffaele [1 ]
Romei, Cristina [1 ]
Ramone, Teresa [1 ]
Prete, Alessandro [1 ]
Tacito, Alessia [1 ]
Cappagli, Virginia [1 ]
Bottici, Valeria [1 ]
Viola, David [1 ]
Torregrossa, Liborio [2 ]
Ugolini, Clara [2 ]
Basolo, Fulvio [2 ]
Elisei, Rossella [1 ]
机构
[1] Univ Hosp Pisa, Dept Clin & Expt Med, Unit Endocrinol, I-56124 Pisa, Italy
[2] Univ Hosp Pisa, Mol Pathol & Crit Area, Dept Surg Med, I-56124 Pisa, Italy
关键词
RET PROTOONCOGENE; RAS MUTATIONS; ACQUIRED-RESISTANCE; LOW-PREVALENCE; CANCER; HEREDITARY; MECHANISMS; PERCENTAGE; DIAGNOSIS; DOMAIN;
D O I
10.1016/j.isci.2019.09.030
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Sporadic Medullary Thyroid Carcinoma (sMTC) is a rare but aggressive thyroid tumor. RET and RAS genes are present in about 50%-80% of cases, but most of the remaining cases are still orphan of a genetic driver. We studied the largest series of sMTC by deep sequencing to define the mutational landscape. With this methodology we greatly reduced the number of RET- or RAS-negative cases and we confirmed the central role of RET and RAS mutations. Moreover, we highlighted the bad prognostic role of RET mutations in sMTC and consolidated the favorable prognostic role of RAS mutations. For the first time, we showed that the variant allele frequency represents an additional prognostic marker inside the group of RET-mutated sMTC.
引用
收藏
页码:324 / +
页数:23
相关论文
共 43 条
[1]   Integrated Genomic Characterization of Papillary Thyroid Carcinoma [J].
Agrawal, Nishant ;
Akbani, Rehan ;
Aksoy, B. Arman ;
Ally, Adrian ;
Arachchi, Harindra ;
Asa, Sylvia L. ;
Auman, J. Todd ;
Balasundaram, Miruna ;
Balu, Saianand ;
Baylin, Stephen B. ;
Behera, Madhusmita ;
Bernard, Brady ;
Beroukhim, Rameen ;
Bishop, Justin A. ;
Black, Aaron D. ;
Bodenheimer, Tom ;
Boice, Lori ;
Bootwalla, Moiz S. ;
Bowen, Jay ;
Bowlby, Reanne ;
Bristow, Christopher A. ;
Brookens, Robin ;
Brooks, Denise ;
Bryant, Robert ;
Buda, Elizabeth ;
Butterfield, Yaron S. N. ;
Carling, Tobias ;
Carlsen, Rebecca ;
Carter, Scott L. ;
Carty, Sally E. ;
Chan, Timothy A. ;
Chen, Amy Y. ;
Cherniack, Andrew D. ;
Cheung, Dorothy ;
Chin, Lynda ;
Cho, Juok ;
Chu, Andy ;
Chuah, Eric ;
Cibulskis, Kristian ;
Ciriello, Giovanni ;
Clarke, Amanda ;
Clayman, Gary L. ;
Cope, Leslie ;
Copland, John A. ;
Covington, Kyle ;
Danilova, Ludmila ;
Davidsen, Tanja ;
Demchok, John A. ;
DiCara, Daniel ;
Dhalla, Noreen .
CELL, 2014, 159 (03) :676-690
[2]   Exomic Sequencing of Medullary Thyroid Cancer Reveals Dominant and Mutually Exclusive Oncogenic Mutations in RET and RAS [J].
Agrawal, Nishant ;
Jiao, Yuchen ;
Sausen, Mark ;
Leary, Rebecca ;
Bettegowda, Chetan ;
Roberts, Nicholas J. ;
Bhan, Sheetal ;
Ho, Allen S. ;
Khan, Zubair ;
Bishop, Justin ;
Westra, William H. ;
Wood, Laura D. ;
Hruban, Ralph H. ;
Tufano, Ralph P. ;
Robinson, Bruce ;
Dralle, Henning ;
Toledo, Sergio P. A. ;
Toledo, Rodrigo A. ;
Morris, Luc G. T. ;
Ghossein, Ronald A. ;
Fagin, James A. ;
Chan, Timothy A. ;
Velculescu, Victor E. ;
Vogelstein, Bert ;
Kinzler, Kenneth W. ;
Papadopoulos, Nickolas ;
Nelkin, Barry D. ;
Ball, Douglas W. .
JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM, 2013, 98 (02) :E364-E369
[3]   TERT Promoter Mutations in Thyroid Cancer [J].
Alzahrani, Ali S. ;
Alsaadi, Rawan ;
Murugan, Avaniyapuram Kannan ;
Bin Sadiq, Bakr .
HORMONES & CANCER, 2016, 7 (03) :165-177
[4]   The emerging clinical relevance of genomics in cancer medicine [J].
Berger, Michael F. ;
Mardis, Elaine R. .
NATURE REVIEWS CLINICAL ONCOLOGY, 2018, 15 (06) :353-365
[5]   Somatic RAS Mutations Occur in a Large Proportion of Sporadic RET-Negative Medullary Thyroid Carcinomas and Extend to a Previously Unidentified Exon [J].
Boichard, A. ;
Croux, L. ;
Al Ghuzlan, A. ;
Broutin, S. ;
Dupuy, C. ;
Leboulleux, S. ;
Schlumberger, M. ;
Bidart, J. M. ;
Lacroix, L. .
JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM, 2012, 97 (10) :E2031-E2035
[6]   Acquired resistance to TKIs in solid tumours: learning from lung cancer [J].
Camidge, D. Ross ;
Pao, William ;
Sequist, Lecia V. .
NATURE REVIEWS CLINICAL ONCOLOGY, 2014, 11 (08) :473-481
[7]   Molecular genetics of medullary thyroid carcinoma: the quest for novel therapeutic targets [J].
Cerrato, Aniello ;
De Falco, Valentina ;
Santoro, Massimo .
JOURNAL OF MOLECULAR ENDOCRINOLOGY, 2009, 43 (3-4) :143-155
[8]   Detection of Molecular Alterations in Taiwanese Patients with Medullary Thyroid Cancer Using Whole-Exome Sequencing [J].
Chang, Ya-Sian ;
Chang, Chun-Chi ;
Huang, Hsi-Yuan ;
Lin, Chien-Yu ;
Yeh, Kun-Tu ;
Chang, Jan-Gowth .
ENDOCRINE PATHOLOGY, 2018, 29 (04) :324-331
[9]   Mechanisms of acquired resistance to tyrosine kinase inhibitors [J].
Chen, Yi-fan ;
Fu, Li-wu .
ACTA PHARMACEUTICA SINICA B, 2011, 1 (04) :197-207
[10]   Evidence of a Low Prevalence of RAS Mutations in a Large Medullary Thyroid Cancer Series [J].
Ciampi, Raffaele ;
Mian, Caterina ;
Fugazzola, Laura ;
Cosci, Barbara ;
Romei, Cristina ;
Barollo, Susi ;
Cirello, Valentina ;
Bottici, Valeria ;
Marconcini, Giulia ;
Rosa, Pelizzo Maria ;
Borrello, Maria Grazia ;
Basolo, Fulvio ;
Ugolini, Clara ;
Materazzi, Gabriele ;
Pinchera, Aldo ;
Elisei, Rossella .
THYROID, 2013, 23 (01) :50-57