Identification of a prognostic ferroptosis-related lncRNA signature in the tumor microenvironment of lung adenocarcinoma

被引:88
作者
Guo, Yugang [1 ]
Qu, Zhongyu [2 ]
Li, Dandan [1 ]
Bai, Fanghui [2 ]
Xing, Juan [2 ]
Ding, Qian [1 ]
Zhou, Jiawei [1 ,3 ]
Yao, Lunguang [1 ]
Xu, Qian [1 ]
机构
[1] Nanyang Normal Univ, Engn Lab Insects Bioreactor, Nanyang, Henan, Peoples R China
[2] Nanyang Cent Hosp, Nanyang, Henan, Peoples R China
[3] Nanyang Normal Univ, Sch Chem & Pharmaceut Engn, Nanyang, Peoples R China
关键词
CELL-DEATH; CANCER; CHEMOTHERAPY; FORM;
D O I
10.1038/s41420-021-00576-z
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Ferroptosis is closely linked to various cancers, including lung adenocarcinoma (LUAD); however, the factors involved in the regulation of ferroptosis-related genes are not well established. In this study, we identified and characterized ferroptosis-related long noncoding RNAs (lncRNAs) in LUAD. In particular, a coexpression network of ferroptosis-related mRNAs and lncRNAs from The Cancer Genome Atlas (TCGA) was constructed. Univariate and multivariate Cox proportional hazards analyses were performed to establish a prognostic ferroptosis-related lncRNA signature (FerRLSig). We obtained a prognostic risk model consisting of 10 ferroptosis-related lncRNAs: AL606489.1, AC106047.1, LINC02081, AC090559.1, AC026355.1, FAM83A-AS1, AL034397.3, AC092171.5, AC010980.2, and AC123595.1. High risk scores according to the FerRLSig were significantly associated with poor overall survival (hazard ratio (HR)=1.412, 95% CI=1.271-1.568; P<0.001). Receiver operating characteristic (ROC) curves and a principal component analysis further supported the accuracy of the model. Next, a prognostic nomogram combining FerRLSig with clinical features was established and showed favorable predictive efficacy for survival risk stratification. In addition, gene set enrichment analysis (GSEA) revealed that FerRLSig is involved in many malignancy-associated immunoregulatory pathways. Based on the risk model, we found that the immune status and response to immunotherapy, chemotherapy, and targeted therapy differed significantly between the high-risk and low-risk groups. These results offer novel insights into the pathogenesis of LUAD, including the contribution of ferroptosis-related lncRNAs, and reveal a prognostic indicator with the potential to inform immunological research and treatment.
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页数:11
相关论文
共 42 条
[1]   NFS1 undergoes positive selection in lung tumours and protects cells from ferroptosis [J].
Alvarez, Samantha W. ;
Sviderskiy, Vladislav O. ;
Terzi, Erdem M. ;
Papagiannakopoulos, Thales ;
Moreira, Andre L. ;
Adams, Sylvia ;
Sabatini, David M. ;
Birsoy, Kivanc ;
Possemato, Richard .
NATURE, 2017, 551 (7682) :639-+
[2]   Ferroptosis and Cancer: Mitochondria Meet the "Iron Maiden" Cell Death [J].
Battaglia, Anna Martina ;
Chirillo, Roberta ;
Aversa, Ilenia ;
Sacco, Alessandro ;
Costanzo, Francesco ;
Biamonte, Flavia .
CELLS, 2020, 9 (06) :1-26
[3]   The CoQ oxidoreductase FSP1 acts parallel to GPX4 to inhibit ferroptosis [J].
Bersuker, Kirill ;
Hendricks, Joseph M. ;
Li, Zhipeng ;
Magtanong, Leslie ;
Ford, Breanna ;
Tang, Peter H. ;
Roberts, Melissa A. ;
Tong, Bingqi ;
Maimone, Thomas J. ;
Zoncu, Roberto ;
Bassik, Michael C. ;
Nomura, Daniel K. ;
Dixon, Scott J. ;
Olzmann, James A. .
NATURE, 2019, 575 (7784) :688-+
[4]  
Bray F, 2018, CA-CANCER J CLIN, V68, P394, DOI [10.3322/caac.21492, 10.3322/caac.21609]
[5]   HGF/Met and FOXM1 form a positive feedback loop and render pancreatic cancer cells resistance to Met inhibition and aggressive phenotypes [J].
Cui, J. ;
Xia, T. ;
Xie, D. ;
Gao, Y. ;
Jia, Z. ;
Wei, D. ;
Wang, L. ;
Huang, S. ;
Quan, M. ;
Xie, K. .
ONCOGENE, 2016, 35 (36) :4708-4718
[6]   FSP1 is a glutathione-independent ferroptosis suppressor [J].
Doll, Sebastian ;
Freitas, Florencio Porto ;
Shah, Ron ;
Aldrovandi, Maceler ;
da Silva, Milene Costa ;
Ingold, Irina ;
Grocin, Andrea Goya ;
da Silva, Thamara Nishida Xavier ;
Panzilius, Elena ;
Scheel, Christina H. ;
Mourao, Andre ;
Buday, Katalin ;
Sato, Mami ;
Wanninger, Jonas ;
Vignane, Thibaut ;
Mohana, Vaishnavi ;
Rehberg, Markus ;
Flatley, Andrew ;
Schepers, Aloys ;
Kurz, Andreas ;
White, Daniel ;
Sauer, Markus ;
Sattler, Michael ;
Tate, Edward William ;
Schmitz, Werner ;
Schulze, Almut ;
O'Donnell, Valerie ;
Proneth, Bettina ;
Popowicz, Grzegorz M. ;
Pratt, Derek A. ;
Angeli, Jose Pedro Friedmann ;
Conrad, Marcus .
NATURE, 2019, 575 (7784) :693-+
[7]   Cancer immunotherapy: the beginning of the end of cancer? [J].
Farkona, Sofia ;
Diamandis, Eleftherios P. ;
Blasutig, Ivan M. .
BMC MEDICINE, 2016, 14
[8]   Global, Regional, and National Cancer Incidence, Mortality, Years of Life Lost, Years Lived With Disability, and Disability-Adjusted Life-Years for 29 Cancer Groups, 1990 to 2017 A Systematic Analysis for the Global Burden of Disease Study [J].
Fitzmaurice, Christina ;
Abate, Degu ;
Abbasi, Naghmeh ;
Abbastabar, Hedayat ;
Abd-Allah, Foad ;
Abdel-Rahman, Omar ;
Abdelalim, Ahmed ;
Abdoli, Amir ;
Abdollahpour, Ibrahim ;
Abdulle, Abdishakur S. M. ;
Abebe, Nebiyu Dereje ;
Abraha, Haftom Niguse ;
Abu-Raddad, Laith Jamal ;
Abualhasan, Ahmed ;
Adedeji, Isaac Akinkunmi ;
Advani, Shailesh M. ;
Afarideh, Mohsen ;
Afshari, Mandi ;
Aghaali, Mohammad ;
Agius, Dominic ;
Agrawal, Sutapa ;
Ahmadi, Ayat ;
Ahmadian, Elham ;
Ahmadpour, Ehsan ;
Ahmed, Muktar Beshir ;
Akbari, Mohammad Esmaeil ;
Akinyemiju, Tomi ;
Al-Aly, Ziyad ;
AlAbdulKader, Assim M. ;
Alandab, Fares ;
Alam, Tahiya ;
Alamene, Genet Melak ;
Alemnew, Birhan Tamene T. ;
Alene, Kefyalew Addis ;
Alinia, Cyrus ;
Alipour, Vahid ;
Aljunid, Syed Mohamed ;
Bakeshei, Fatemeh Allah ;
Abdulrahman, Majid ;
Almadi, Hamad ;
Almasi-Hashiani, Amir ;
Alsharif, Ubai ;
Alsowaidi, Shirina ;
Alvis-Guzman, Nelson ;
Amini, Erfan ;
Amini, Saeed ;
Amoako, Yaw Ampem ;
Anbari, Zohreh ;
Anber, Nahla Hamed ;
Andrei, Catalina Liliana .
JAMA ONCOLOGY, 2019, 5 (12) :1749-1768
[9]   Targeting Ferroptosis to Iron Out Cancer [J].
Hassannia, Behrouz ;
Vandenabeele, Peter ;
Vanden Berghe, Tom .
CANCER CELL, 2019, 35 (06) :830-849
[10]   Prognostic Value of Tumor-Infiltrating Lymphocyte Density Assessed Using a Standardized Method Based on Molecular Subtypes and Adjuvant Chemotherapy in Invasive Breast Cancer [J].
Jang, Nuri ;
Kwon, Hee Jung ;
Park, Min Hui ;
Kang, Su Hwan ;
Bae, Young Kyung .
ANNALS OF SURGICAL ONCOLOGY, 2018, 25 (04) :937-946