Experimental Binding Energies in Supramolecular Complexes

被引:421
作者
Biedermann, Frank [1 ]
Schneider, Hans-joerg [2 ]
机构
[1] Karlsruhe Inst Technol, Inst Nanotechnol, Hermann von Helmholtz Pl 1, D-76344 Eggenstein Leopoldshafen, Germany
[2] Univ Saarland, FR Organ Chem, D-66041 Saarbrucken, Germany
关键词
CATION-PI INTERACTIONS; VAN-DER-WAALS; HOST-GUEST COMPLEXES; DOUBLE-MUTANT CYCLES; ENTHALPY-ENTROPY COMPENSATION; FACE AROMATIC INTERACTIONS; CYCLODEXTRIN INCLUSION COMPLEXES; WEAK INTERMOLECULAR INTERACTIONS; DYNAMIC COMBINATORIAL LIBRARIES; ORTHOGONAL DIPOLAR INTERACTIONS;
D O I
10.1021/acs.chemrev.5b00583
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
On the basis of many literature measurements, a critical overview is given on essential noncovalent interactions in synthetic supramolecular complexes, accompanied by analyses with selected proteins. The methods, which can be applied to derive binding increments for single noncovalent interactions, start with the evaluation of consistency and additivity with a sufficiently large number of different host-guest complexes by applying linear free energy relations. Other strategies involve the use of double mutant cycles, of molecular balances, of dynamic combinatorial libraries, and of crystal structures. Promises and limitations of these strategies are discussed. Most of the analyses stem from solution studies, but a few also from gas phase. The empirically derived interactions are then presented on the basis of selected complexes with respect to ion pairing, hydrogen bonding, electrostatic contributions, halogen bonding, pi-pi-stacking, dispersive forces, cation-pi and anion-pi interactions, and contributions from the hydrophobic effect. Cooperativity in host-guest complexes as well as in self-assembly, and entropy factors are briefly highlighted. Tables with typical values for single noncovalent free energies and polarity parameters are in the Supporting Information.
引用
收藏
页码:5216 / 5300
页数:85
相关论文
共 778 条
  • [61] Halogen bonding in solution: thermodynamics and applications
    Beale, Thomas M.
    Chudzinski, Michael G.
    Sarwar, Mohammed G.
    Taylor, Mark S.
    [J]. CHEMICAL SOCIETY REVIEWS, 2013, 42 (04) : 1667 - 1680
  • [62] Discovery of Linear Receptors for Multiple Dihydrogen Phosphate Ions Using Dynamic Combinatorial Chemistry
    Beeren, Sophie R.
    Sanders, Jeremy K. M.
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2011, 133 (11) : 3804 - 3807
  • [63] Dynamic imine chemistry
    Belowich, Matthew E.
    Stoddart, J. Fraser
    [J]. CHEMICAL SOCIETY REVIEWS, 2012, 41 (06) : 2003 - 2024
  • [64] Myths and verities in protein folding theories: From Frank and Evans iceberg-conjecture to explanation of the hydrophobic effect
    Ben-Naim, Arieh
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2013, 139 (16)
  • [65] Ben-Xaim A., 2011, Open Journal of Biophysics, V1, P1, DOI DOI 10.4236/OJBIPHY.2011.11001
  • [66] SELECTIVE RECOGNITION OF CARBOXYLATE ANIONS BY POLYAMMONIUM RECEPTORS IN AQUEOUS-SOLUTION - CRITERIA FOR SELECTIVITY IN MOLECULAR RECOGNITION
    BENCINI, A
    BIANCHI, A
    BURGUETE, MI
    DAPPORTO, P
    DOMENECH, A
    GARCIAESPANA, E
    LUIS, SV
    PAOLI, P
    RAMIREZ, JA
    [J]. JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, 1994, (03): : 569 - 577
  • [67] SOLVATION THERMODYNAMICS OF NONIONIC SOLUTES
    BENNAIM, A
    MARCUS, Y
    [J]. JOURNAL OF CHEMICAL PHYSICS, 1984, 81 (04) : 2016 - 2027
  • [68] Berl V, 2002, CHEM-EUR J, V8, P1227, DOI 10.1002/1521-3765(20020301)8:5<1227::AID-CHEM1227>3.0.CO
  • [69] 2-0
  • [70] The Protein Data Bank
    Berman, HM
    Westbrook, J
    Feng, Z
    Gilliland, G
    Bhat, TN
    Weissig, H
    Shindyalov, IN
    Bourne, PE
    [J]. NUCLEIC ACIDS RESEARCH, 2000, 28 (01) : 235 - 242