Regioselectivity of oxidation by a polysaccharide monooxygenase from Chaetomium thermophilum

被引:45
作者
Chen, Chen [1 ]
Chen, Jinyin [1 ]
Geng, Zhigang [1 ]
Wang, Meixia [1 ]
Liu, Ning [1 ]
Li, Duochuan [1 ]
机构
[1] Shandong Agr Univ, Dept Mycol, Tai An 271018, Shandong, Peoples R China
关键词
Chaetomium thermophilum; Auxiliary activity family 9 (AA9); Polysaccharide monooxygenase (PMO); Regioselectivity of oxidation; C1; C4 and C6 oxidation; GLYCOSIDE HYDROLASE FAMILY; PHANEROCHAETE-CHRYSOSPORIUM; CELLOBIOSE DEHYDROGENASE; CELLULOSE DEGRADATION; GALACTOSE-OXIDASE; CRYSTAL-STRUCTURE; STRUCTURAL BASIS; FUNGI; CATALYSIS; PROTEINS;
D O I
10.1186/s13068-018-1156-2
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Background: Polysaccharide monooxygenases (PMOs) of the auxiliary activity 9 (AA9) family have been reported to oxidize C1, C4, and C6 positions in cellulose However, currently no direct evidence exists that PMOs oxidize C6 positions in cellulose, and molecular mechanism of C1, C4 and C6 oxidation is unclear. Results: In this study, a PMO gene (Ctpmo1) belonging to AA9 was isolated from Chaetomium thermophilum and successfully expressed and correctly processed in Pichia pastoris A simple and effective chemical method of using Br-2 to oxidize CtPMOl reaction products was developed to directly identify C4- and C6-oxidized products by matrix-assisted laser desorption/ionization-time-of-flight tandem mass spectrometry (MALDI-TOF-MS) The PMO (CtPMOl) cleaves phosphoric acid-swollen cellulose (PASC) and celloheptaose, resulting in the formation of oxidized and nonoxidized oligosaccharides. Product identification shows that the enzyme can oxidize C1, C4, and C6 in PASC and cello-oligosaccharides Mutagenesis of the aromatic residues Tyr27, His64, His157 and residue Tyr206 on the flat surface of CtPMO1 was carried out using site-directed mutagenesis to form the mutated enzymes Y27A, H64A, H157A, and Y206A. It was demonstrated that Y27A retained complete activity of C1, C4, and C6 oxidation on cellulose; Y206A retained partial activity of C1 and C4 oxidation but completely lost activity of C6 oxidation on cellulose; H64A almost completely lost activity of C1, C4, and C6 oxidation on cellulose; and H157A completely lost activity of C1, C4, and C6 oxidation on cellulose. Conclusions: This finding provides direct and molecular evidence for C1, C4, especially C6 oxidation by lytic polysaccharide monooxygenase. CtPMO1 oxidizes not only C1 and C4 but also C6 positions in cellulose The aromatic acid residues His64, His157 and residueTyr206 on CtPMO1 flat surface are involved in activity of C1, C4, C6 oxidation.
引用
收藏
页数:16
相关论文
共 43 条
[1]   NMR structure of a lytic polysaccharide monooxygenase provides insight into copper binding, protein dynamics, and substrate interactions [J].
Aachmann, Finn L. ;
Sorlie, Morten ;
Skjak-Braek, Gudmund ;
Eijsink, Vincent G. H. ;
Vaaje-Kolstad, Gustav .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (46) :18779-18784
[2]   Insight into Structure and Assembly of the Nuclear Pore Complex by Utilizing the Genome of a Eukaryotic Thermophile [J].
Amlacher, Stefan ;
Sarges, Phillip ;
Flemming, Dirk ;
van Noort, Vera ;
Kunze, Ruth ;
Devos, Damien P. ;
Arumugam, Manimozhiyan ;
Bork, Peer ;
Hurt, Ed .
CELL, 2011, 146 (02) :277-289
[3]   Oxidative Cleavage of Cellulose by Fungal Copper-Dependent Polysaccharide Monooxygenases [J].
Beeson, William T. ;
Phillips, Christopher M. ;
Cate, Jamie H. D. ;
Marletta, Michael A. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2012, 134 (02) :890-892
[4]   Substrate specificity and regioselectivity of fungal AA9 lytic polysaccharide monooxygenases secreted by Podospora anserina [J].
Bennati-Granier, Chloe ;
Garajova, Sona ;
Champion, Charlotte ;
Grisel, Sacha ;
Haon, Mireille ;
Zhou, Simeng ;
Fanuel, Mathieu ;
Ropartz, David ;
Rogniaux, Helene ;
Gimbert, Isabelle ;
Record, Eric ;
Berrin, Jean-Guy .
BIOTECHNOLOGY FOR BIOFUELS, 2015, 8
[5]   Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris [J].
Berka, Randy M. ;
Grigoriev, Igor V. ;
Otillar, Robert ;
Salamov, Asaf ;
Grimwood, Jane ;
Reid, Ian ;
Ishmael, Nadeeza ;
John, Tricia ;
Darmond, Corinne ;
Moisan, Marie-Claude ;
Henrissat, Bernard ;
Coutinho, Pedro M. ;
Lombard, Vincent ;
Natvig, Donald O. ;
Lindquist, Erika ;
Schmutz, Jeremy ;
Lucas, Susan ;
Harris, Paul ;
Powlowski, Justin ;
Bellemare, Annie ;
Taylor, David ;
Butler, Gregory ;
de Vries, Ronald P. ;
Allijn, Iris E. ;
van den Brink, Joost ;
Ushinsky, Sophia ;
Storms, Reginald ;
Powell, Amy J. ;
Paulsen, Ian T. ;
Elbourne, Liam D. H. ;
Baker, Scott E. ;
Magnuson, Jon ;
LaBoissiere, Sylvie ;
Clutterbuck, A. John ;
Martinez, Diego ;
Wogulis, Mark ;
de Leon, Alfredo Lopez ;
Rey, Michael W. ;
Tsang, Adrian .
NATURE BIOTECHNOLOGY, 2011, 29 (10) :922-U222
[6]   Cello-Oligosaccharide Oxidation Reveals Differences between Two Lytic Polysaccharide Monooxygenases (Family GH61) from Podospora anserina [J].
Bey, Mathieu ;
Zhou, Simeng ;
Poidevin, Laetitia ;
Henrissat, Bernard ;
Coutinho, Pedro M. ;
Berrin, Jean-Guy ;
Sigoillot, Jean-Claude .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2013, 79 (02) :488-496
[7]   Structural and Functional Characterization of a Lytic Polysaccharide Monooxygenase with Broad Substrate Specificity [J].
Borisova, Anna S. ;
Isaksen, Trine ;
Dimarogona, Maria ;
Kognole, Abhishek A. ;
Mathiesen, Geir ;
Varnai, Aniko ;
Rohr, Asmund K. ;
Payne, Christina M. ;
Sorlie, Morten ;
Sandgren, Mats ;
Eijsink, Vincent G. H. .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2015, 290 (38) :22955-22969
[8]   A SYSTEMATIC NOMENCLATURE FOR CARBOHYDRATE FRAGMENTATIONS IN FAB-MS MS SPECTRA OF GLYCOCONJUGATES [J].
DOMON, B ;
COSTELLO, CE .
GLYCOCONJUGATE JOURNAL, 1988, 5 (04) :397-409
[9]   The Plant Cell Wall-Decomposing Machinery Underlies the Functional Diversity of Forest Fungi [J].
Eastwood, Daniel C. ;
Floudas, Dimitrios ;
Binder, Manfred ;
Majcherczyk, Andrzej ;
Schneider, Patrick ;
Aerts, Andrea ;
Asiegbu, Fred O. ;
Baker, Scott E. ;
Barry, Kerrie ;
Bendiksby, Mika ;
Blumentritt, Melanie ;
Coutinho, Pedro M. ;
Cullen, Dan ;
de Vries, Ronald P. ;
Gathman, Allen ;
Goodell, Barry ;
Henrissat, Bernard ;
Ihrmark, Katarina ;
Kauserud, Havard ;
Kohler, Annegret ;
LaButti, Kurt ;
Lapidus, Alla ;
Lavin, Jose L. ;
Lee, Yong-Hwan ;
Lindquist, Erika ;
Lilly, Walt ;
Lucas, Susan ;
Morin, Emmanuelle ;
Murat, Claude ;
Oguiza, Jose A. ;
Park, Jongsun ;
Pisabarro, Antonio G. ;
Riley, Robert ;
Rosling, Anna ;
Salamov, Asaf ;
Schmidt, Olaf ;
Schmutz, Jeremy ;
Skrede, Inger ;
Stenlid, Jan ;
Wiebenga, Ad ;
Xie, Xinfeng ;
Kuees, Ursula ;
Hibbett, David S. ;
Hoffmeister, Dirk ;
Hogberg, Nils ;
Martin, Francis ;
Grigoriev, Igor V. ;
Watkinson, Sarah C. .
SCIENCE, 2011, 333 (6043) :762-765
[10]   Polyglucuronic acids: Structures, functions and degrading enzymes [J].
Elboutachfaiti, R. ;
Delattre, C. ;
Petit, E. ;
Michaud, P. .
CARBOHYDRATE POLYMERS, 2011, 84 (01) :1-13