Graph characterisation using graphlet-based entropies

被引:4
作者
Aziz, Furqan [1 ,2 ,3 ,4 ]
Akbar, Mian Saeed [5 ]
Jawad, Muhammad [6 ]
Malik, Abdul Haseeb [6 ]
Uddin, M. Irfan [7 ]
Gkoutos, Georgios, V [1 ,2 ,3 ,4 ,8 ,9 ,10 ]
机构
[1] Univ Birmingham, Ctr Computat Biol, Birmingham B15 2TT, W Midlands, England
[2] Univ Birmingham, Coll Med & Dent Sci, Inst Canc & Genom Sci, Birmingham B15 2TT, W Midlands, England
[3] Univ Hosp Birmingham NHS Fdn Trust, Inst Translat Med, Birmingham B15 2TT, W Midlands, England
[4] MRC Hlth Data Res UK HDR, Midlands, England
[5] Inst Management Sci, Peshawar, Pakistan
[6] Univ Peshawar, Dept Comp Sci, Peshawar, Pakistan
[7] Kohat Univ Sci & Technol, Inst Comp, Kohat, Pakistan
[8] NIHR Expt Canc Med Ctr, Birmingham B15 2TT, W Midlands, England
[9] NIHR Surg Reconstruct & Microbiol Res Ctr, Birmingham B15 2TT, W Midlands, England
[10] NIHR Biomed Res Ctr, Birmingham B15 2TT, W Midlands, England
基金
英国科研创新办公室; 欧盟地平线“2020”;
关键词
Graph entropy; Graph characterisation; Information functional; Graphlets; ALGORITHM;
D O I
10.1016/j.patrec.2021.03.031
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
In this paper, we present a general framework to estimate the network entropy that is represented by means of an undirected graph and subsequently employ this framework for graph classification tasks. The proposed framework is based on local information functionals which are defined using induced connected subgraphs of different sizes. These induced subgraphs are termed graphlets. Specifically, we extract the set of all graphlets of a specific sizes and compute the graph entropy using our proposed framework. To classify the network into different categories, we construct a feature vector whose components are obtained by computing entropies of different graphlet sizes. We apply the proposed framework to two different tasks, namely view-based object recognition and biomedical datasets with binary outcomes classification. Finally, we report and compare the classification accuracies of the proposed method and compare against some of the state-of-the-art methods. (c) 2021 Elsevier B.V. All rights reserved.
引用
收藏
页码:100 / 107
页数:8
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