Profiling of Mass Spectrometry Data for Ovarian Cancer Detection Using Negative Correlation Learning

被引:0
作者
He, Shan [1 ]
Chen, Huanhuan [1 ]
Li, Xiaoli [1 ]
Yao, Xin [1 ]
机构
[1] Univ Birmingham, Sch Comp Sci, Cercia, Birmingham B15 2TT, W Midlands, England
来源
ARTIFICIAL NEURAL NETWORKS - ICANN 2009, PT II | 2009年 / 5769卷
关键词
negative correlation learning; bioinformatics; proteomics; data mining; SERUM; DIAGNOSIS; ALGORITHM; ENSEMBLES;
D O I
暂无
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
This paper proposes a novel Mass Spectrometry data profiling method for ovarian cancer detection based on negative correlation learning (NCL). A modified Smoothed Nonlinear Energy Operator (SNEO) and correlation-based peak selection were applied to detected informative peaks for NCL. to build a prediction model. In order to evaluate the performance of this novel method without bias, we employed randomization techniques by dividing the data set into testing set and training set to test the whole procedure for many times over. The classification performance of the proposed approach compared favorably with six machine learning algorithms.
引用
收藏
页码:185 / 194
页数:10
相关论文
共 21 条
  • [1] Random forests
    Breiman, L
    [J]. MACHINE LEARNING, 2001, 45 (01) : 5 - 32
  • [2] Random forests
    Breiman, L
    [J]. MACHINE LEARNING, 2001, 45 (01) : 5 - 32
  • [3] Brown G, 2005, J MACH LEARN RES, V6, P1621
  • [4] A tutorial on Support Vector Machines for pattern recognition
    Burges, CJC
    [J]. DATA MINING AND KNOWLEDGE DISCOVERY, 1998, 2 (02) : 121 - 167
  • [5] Chen HH, 2007, IEEE C EVOL COMPUTAT, P1468
  • [6] High-resolution serum proteomic features for ovarian cancer detection
    Conrads, TP
    Fusaro, VA
    Ross, S
    Johann, D
    Rajapakse, V
    Hitt, BA
    Steinberg, SM
    Kohn, EC
    Fishman, DA
    Whiteley, G
    Barrett, JC
    Liotta, LA
    Petricoin, EF
    Veenstra, TD
    [J]. ENDOCRINE-RELATED CANCER, 2004, 11 (02) : 163 - 178
  • [7] Cooperative coevolution of artificial neural network ensembles for pattern classification
    García-Pedrajas, N
    Hervás-Martínez, U
    Ortiz-Boyer, D
    [J]. IEEE TRANSACTIONS ON EVOLUTIONARY COMPUTATION, 2005, 9 (03) : 271 - 302
  • [8] Hall M. A., 1999, Proceedings of the Twelfth International Florida AI Research Society Conference, P235
  • [9] NEURAL NETWORK ENSEMBLES
    HANSEN, LK
    SALAMON, P
    [J]. IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 1990, 12 (10) : 993 - 1001
  • [10] He S, 2007, LECT NOTES COMPUT SC, V4881, P860