A Three-Dimensional Reconstruction Algorithm for Scanning Transmission Electron Microscopy Data from a Single Sample Orientation

被引:9
|
作者
Brown, Hamish G. [1 ,10 ]
Pelz, Philipp M. [1 ,2 ]
Hsu, Shang-Lin [1 ,2 ]
Zhang, Zimeng [2 ]
Ramesh, Ramamoorthy [2 ,3 ]
Inzani, Katherine [4 ,5 ]
Sheridan, Evan [4 ,5 ,6 ]
Griffin, Sinead M. [4 ,5 ]
Schloz, Marcel [7 ]
Pekin, Thomas C. [7 ]
Koch, Christoph T. [7 ]
Findlay, Scott D. [8 ]
Allen, Leslie J. [9 ]
Scott, Mary C. [1 ,2 ]
Ophus, Colin [1 ]
Ciston, Jim [1 ]
机构
[1] Lawrence Berkeley Natl Lab, Natl Ctr Elect Microscopy Facil, Mol Foundry, Berkeley, CA 94720 USA
[2] Univ Calif Berkeley, Dept Mat Sci & Engn, Berkeley, CA 94720 USA
[3] Univ Calif Berkeley, Dept Phys, Berkeley, CA 94720 USA
[4] Lawrence Berkeley Natl Lab, Div Mat Sci, Berkeley, CA 94720 USA
[5] Lawrence Berkeley Natl Lab, Mol Foundry, Berkeley, CA 94720 USA
[6] Kings Coll London, Dept Phys, Theory & Simulat Condensed Matter, London WC2R 2LS, England
[7] Humboldt Univ, Dept Phys IRIS Adlershof, Newtonstr 15, D-12489 Berlin, Germany
[8] Monash Univ, Sch Phys & Astron, Clayton, Vic 3800, Australia
[9] Univ Melbourne, Sch Phys, Parkville, Vic 3010, Australia
[10] Univ Melbourne, Bio21 Mol Sci & Biotechnol Inst, Ian Holmes Imaging Ctr, Parkville, Vic 3052, Australia
基金
澳大利亚研究理事会;
关键词
differential phase contrast; image reconstruction; ptychography; scanning transmission electron microscopy; RESOLUTION; PTYCHOGRAPHY; RETRIEVAL; INVERSION;
D O I
10.1017/S1431927622012090
中图分类号
T [工业技术];
学科分类号
08 ;
摘要
Increasing interest in three-dimensional nanostructures adds impetus to electron microscopy techniques capable of imaging at or below the nanoscale in three dimensions. We present a reconstruction algorithm that takes as input a focal series of four-dimensional scanning transmission electron microscopy (4D-STEM) data. We apply the approach to a lead iridate, PbIrO, and yttrium-stabilized zirconia, YZrO, heterostructure from data acquired with the specimen in a single plan-view orientation, with the epitaxial layers stacked along the beam direction. We demonstrate that Pb-Ir atomic columns are visible in the uppermost layers of the reconstructed volume. We compare this approach to the alternative techniques of depth sectioning using differential phase contrast scanning transmission electron microscopy (DPC-STEM) and multislice ptychographic reconstruction.
引用
收藏
页码:1632 / 1640
页数:9
相关论文
共 50 条
  • [1] Three-dimensional reconstruction methods in Single Particle Analysis from transmission electron microscopy data
    Carazo, J. M.
    Sorzano, C. O. S.
    Oton, J.
    Marabini, R.
    Vargas, J.
    ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 2015, 581 : 39 - 48
  • [2] Three-Dimensional Scanning Transmission Electron Microscopy of Biological Specimens
    de Jonge, Niels
    Sougrat, Rachid
    Northan, Brian M.
    Pennycook, Stephen J.
    MICROSCOPY AND MICROANALYSIS, 2010, 16 (01) : 54 - 63
  • [3] Three-Dimensional Reconstruction of a Surface Based on Scanning Electron Microscopy Images
    Mikhutkin, A. A.
    Vasiliev, A. L.
    CRYSTALLOGRAPHY REPORTS, 2014, 59 (06) : 908 - 915
  • [4] Fracture matching with stereo scanning electron microscopy and three-dimensional reconstruction
    Mershon, WJ
    Danzl, R
    SCANNING, 2006, 28 (02) : 89 - 89
  • [5] Three-dimensional reconstruction of a surface based on scanning electron microscopy images
    A. A. Mikhutkin
    A. L. Vasiliev
    Crystallography Reports, 2014, 59 : 908 - 915
  • [6] Liquid and Three-Dimensional Scanning Transmission Electron Microscopy for Biological Specimen
    de Jonge, N.
    Dukes, M. J.
    Kremers, G. J.
    Northan, B. M.
    Peckys, D. B.
    Ring, E. A.
    Piston, D. W.
    Sougrat, R.
    MICROSCOPY AND MICROANALYSIS, 2009, 15 : 686 - 687
  • [7] Three-dimensional scanning transmission electron microscopy of dislocation loops in tungsten
    Hasanzadeh, S.
    Schaeublin, R.
    Decamps, B.
    Rousson, V.
    Autissier, E.
    Barthe, M. F.
    Hebert, C.
    MICRON, 2018, 113 : 24 - 33
  • [8] TomoJ: tomography software for three-dimensional reconstruction in transmission electron microscopy
    Messaoudil, Cedric
    Boudier, Thomas
    Oscar Sanchez Sorzano, Carlos
    Marco, Sergio
    BMC BIOINFORMATICS, 2007, 8 (1)
  • [9] TomoJ: tomography software for three-dimensional reconstruction in transmission electron microscopy
    Cédric MessaoudiI
    Thomas Boudier
    Carlos Oscar Sanchez Sorzano
    Sergio Marco
    BMC Bioinformatics, 8
  • [10] Three-dimensional Observation of Carbon Nanostructures with Confocal Scanning Transmission Electron Microscopy
    Hashimoto, A.
    Shimojo, M.
    Mitsuishi, K.
    Takeguchi, M.
    MICROSCOPY AND MICROANALYSIS, 2009, 15 : 636 - 637