Dyella halodurans sp nov., isolated from lower subtropical forest soil

被引:6
作者
Cai, Yu-min [1 ]
Gao, Zeng-hong [1 ]
Chen, Mei-hong [1 ]
Huang, Yi-xian [1 ]
Qiu, Li-hong [1 ]
机构
[1] Sun Yat Sen Univ, Sch Life Sci, State Key Lab Biocontrol, Guangzhou 510275, Guangdong, Peoples R China
基金
中国国家自然科学基金;
关键词
housekeeping gene; phylogeny; Dyella; DEOXYRIBONUCLEIC-ACID; GEN.-NOV; SEQUENCES; FAMILY;
D O I
10.1099/ijsem.0.002969
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-stain-negative, aerobic, non-endospore-forming, motile by a polar flagellum, rod-shaped bacterium, designated strain DHOG02(T), which produced yellow-pigmented colonies, was isolated from a soil sample collected from the lower subtropical forest of the Dinghushan Biosphere Reserve, Guangdong Province, PR China. Strain DHOG02(T) grew at 12-37 degrees C, pH 4-9 and 0-4 % (w/v) NaCl, with optima at 28 degrees C, pH 6-7 and 0.5 % (w/v) NaCl. Phylogenetic analyses based on 16S rRNA gene sequences showed that this strain formed a Glade with Dyella lipolytica DHOBO7(T) and Dyella jejuensis JP1(T), with sequence similarities of 98.0 and 97.4 %, respectively. The result of the concatenated partial gyrB, lepA and recA gene sequence analysis confirmed that strain DHOGO2(T) belongs to the genus Dyella, but is distinct from all currently known species of the genus. The G+C content of the genomic DNA was 62 mol%. The major polar lipids were phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, an unidentified aminophospholipid and phospholipid. Ubiquinone-8 was the only respiratory quinone detected, and iso-C-15:1, iso-C-17:1 omega 9c and summed feature 3 (C-16:1 omega 6c and/or C-16:1 omega 7c) were the major fatty acids, all of which supported the affiliation of strain DHOGO2(T) to the genus Dyella. On the basis of the evidence presented here, strain DHOGO2(T) represents a novel species of the genus Dyella, for which the name Dyella halodurans sp. nov. is proposed. The type strain is DHOGO2(T)(=NBRC 111474(T)=CGMCC 1.15435(T)).
引用
收藏
页码:3237 / 3242
页数:6
相关论文
共 32 条
[1]   Dyella koreensis sp nov., a β-glucosidase-producing bacterium [J].
An, DS ;
Im, WT ;
Yang, HC ;
Yang, DC ;
Lee, ST .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2005, 55 :1625-1628
[2]   Dyella thiooxydans sp. nov., a facultatively chemolithotrophic, thiosulfate-oxidizing bacterium isolated from rhizosphere soil of sunflower (Helianthus annuus L.) [J].
Anandham, Rangasamy ;
Kwon, Soon-Wo ;
Gandhi, Pandiyan Indira ;
Kim, Soo-Jin ;
Weon, Hang-Yeon ;
Kim, Yi-Seul ;
Sa, Tong-Min ;
Kim, Yong-Ki ;
Jee, Hyeong-Jin .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2011, 61 :392-398
[3]  
[Anonymous], 1994, METHODS GEN MOL BACT
[4]  
Atlas R.M., 1993, HDB MICROBIOLOGY MED
[5]  
BAUER AW, 1966, AM J CLIN PATHOL, V45, P493
[6]  
Brown AE, 1985, Benson's Microbiological applications: laboratory manual in general Microbiology, V4th
[7]   Dyella agri sp nov., isolated from reclaimed grassland soil [J].
Chaudhary, Dhiraj Kumar ;
Kim, Jaisoo .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2017, 67 (10) :4246-4252
[8]  
Chen MH, 2017, INT J SYST EVOL MICR, V67, P736, DOI [10.1099/ijsem.0.001716, 10.1099/ijsem.0.001946]
[9]   Dyella humi sp nov., isolated from forest soil [J].
Chen, Mei-Hong ;
Lv, Ying-Ying ;
Wang, Jia ;
Tang, Liang ;
Qiu, Li-Hong .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 :4372-4376
[10]   ARCHAEA IN COASTAL MARINE ENVIRONMENTS [J].
DELONG, EF .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1992, 89 (12) :5685-5689