Easy preparation of novel 3,3-dimethyl-3,4-dihydro-2H-1,2,4-benzothiadiazine 1,1-dioxide: Molecular structure, Hirshfeld surface, NCI analyses and molecular docking on AMPA receptors

被引:8
作者
Etse, Koffi Senam [1 ]
Zaragoza, Guillermo [2 ]
Etse, Kodjo Djidjole [3 ]
机构
[1] Univ Liege, Ctr Interdisciplinary Res Med CIRM, Med Chem Lab, Quartier Hop, B36 Av Hippocrate 15, B-4000 Liege, Belgium
[2] Univ Santiago de Compostela, Unidade Difracc Raios X, RIAIDT, Campus VIDA, Santiago De Compostela 15782, Spain
[3] Univ Lome UL, Fac Sci FDS, Lab Physiol & Biotechnol Vegetales LPBV, Lome, Togo
关键词
Benzothiadiazine 1,1-dioxide; X-ray molecular structures; Hirshfeld surface; NCI plot; Molecular docking; AMPA receptors; POSITIVE ALLOSTERIC MODULATORS; EXPLORING INTERMOLECULAR INTERACTIONS; MODEL ENERGIES; MECHANISM; CYCLOTHIAZIDE; POTENTIATION; HIPPOCAMPAL; DISCOVERY;
D O I
10.1016/j.molstruc.2021.130435
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We present in this study the synthesis and characterization of a new 3,3-dimethyl-substituted 1,2,4-benzothiadiazine 1,1-dioxide. 3,3-dimethyl-3,4-dihydro-2H-1,2,4-benzothiadiazine 1,1-dioxide 10, was obtained by reacting 2-aminobenzenesulfonamide with acetone. The molecular structures of the starting sulfonamide and the new benzothiadiazine were obtained by X-ray diffraction analysis and the interactions like hydrogen bonds stabilizing the crystal packing were discussed. The contacts are confirmed by non-covalent interaction analysis. Analyses of Hirshfeld surface mapped over d(i), d(e), d(norm) and shapeindex were further used to identify the intermolecular interactions. The fingerprint histogram allow to show that H center dot center dot center dot H (45.7%) and O center dot center dot center dot H (30.1%) contacts are the dominant interactions in the crystal packing of 10. The effects of the molecular environment were accessed by analyzing the electron density isosurface and the 3D-topology of energy frameworks. The prediction of physicochemical properties suggested that 10 could be considered as a lead-like drug. Therefore, molecular docking study was performed on the alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptor (AMPAR) and suggested that 10 could interact with the allosteric site located on the ligand binding domain of AMPAR and could be a positive allosteric modulator. Docking results show that 10 can bind in a symmetrical way in the GluA2 ligand binding domain with two molecules at the dimer interface. The results also demonstrated that the presence of two methyl groups at the 3-position of the thiadiazine ring induced rotation of 10 in the binding site leading to close contacts with Pro494, Ser497, Ser729 and Ser754. (C) 2021 Elsevier B.V. All rights reserved.
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页数:14
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共 48 条
  • [1] Effects of the potent ampakine CX614 on hippocampal and recombinant AMPA receptors: Interactions with cyclothiazide and GYKI 52466
    Arai, AC
    Kessler, M
    Rogers, G
    Lynch, G
    [J]. MOLECULAR PHARMACOLOGY, 2000, 58 (04) : 802 - 813
  • [2] BERTOLINO M, 1993, RECEPTOR CHANNEL, V1, P267
  • [3] A SYNAPTIC MODEL OF MEMORY - LONG-TERM POTENTIATION IN THE HIPPOCAMPUS
    BLISS, TVP
    COLLINGRIDGE, GL
    [J]. NATURE, 1993, 361 (6407) : 31 - 39
  • [4] A rule of three for fragment-based lead discovery?
    Congreve, M
    Carr, R
    Murray, C
    Jhoti, H
    [J]. DRUG DISCOVERY TODAY, 2003, 8 (19) : 876 - 877
  • [5] GENERAL DEFINITION OF RING PUCKERING COORDINATES
    CREMER, D
    POPLE, JA
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1975, 97 (06) : 1354 - 1358
  • [6] Enhancing Action of Positive Allosteric Modulators through the Design of Dimeric Compounds
    Drapier, Thomas
    Geubelle, Pierre
    Bouckaer, Charlotte
    Nielsen, Lise
    Laulumaa, Saara
    Goffin, Eric
    Dilly, Sebastien
    Francotte, Pierre
    Hanson, Julien
    Pochet, Lionel
    Kastrup, Jette Samm
    Pirotte, Bernard
    [J]. JOURNAL OF MEDICINAL CHEMISTRY, 2018, 61 (12) : 5279 - 5291
  • [7] Intermolecular interactions in molecular crystals: what's in a name?
    Edwards, Alison J.
    Mackenzie, Campbell F.
    Spackman, Peter R.
    Jayatilaka, Dylan
    Spackman, Mark A.
    [J]. FARADAY DISCUSSIONS, 2017, 203 : 93 - 112
  • [8] One-pot, Pd/Cu-catalysed synthesis of alkynyl-substituted 3-ylidene-dihydrobenzo[d]isothiazole 1,1-dioxides
    Etse, Koffi Senam
    Dassonneville, Benjamin
    Zaragoza, Guillermo
    Demonceau, Albert
    [J]. TETRAHEDRON LETTERS, 2017, 58 (08) : 789 - 793
  • [9] WinGX and ORTEP for Windows: an update
    Farrugia, Louis J.
    [J]. JOURNAL OF APPLIED CRYSTALLOGRAPHY, 2012, 45 : 849 - 854
  • [10] Use of self-organizing maps and molecular descriptors to predict the cytotoxic activity of sesquiterpene lactones
    Fernandes, Mariane B.
    Scotti, Marcus T.
    Ferreira, Marcelo J. P.
    Emerenciano, Vicente P.
    [J]. EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 2008, 43 (10) : 2197 - 2205