A graphene-enhanced molecular beacon for homogeneous DNA detection

被引:207
作者
Li, Fan [1 ]
Huang, Yan [2 ]
Yang, Qing [1 ]
Zhong, Zentao [2 ]
Li, Di [1 ]
Wang, Lihua [1 ]
Song, Shiping [1 ]
Fan, Chunhai [1 ]
机构
[1] Chinese Acad Sci, Shanghai Inst Appl Phys, Phys Biol Lab, Shanghai 201800, Peoples R China
[2] Nanjing Agr Univ, Nanjing 213017, Jiangsu Prov, Peoples R China
关键词
MESSENGER-RNA DETECTION; HYBRIDIZATION; OXIDE; PROBES; IMMOBILIZATION; FLUORESCE; KINETICS; MISMATCH;
D O I
10.1039/b9nr00401g
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
In this work, we report the design of a novel graphene-based molecular beacon (MB) that could sensitively and selectively detect specific DNA sequences. The ability of water-soluble graphene oxide (GO) to differentiated hairpin and dsDNA offered a new approach to detect DNA. We found that the background fluorescence of MB was significantly suppressed in the presence of GO, which increased the signal-to-background ratio, hence the sensitivity. Moreover, the single-mismatch differentiation ability of hairpin DNA was maintained, leading to high selectivity of this new method.
引用
收藏
页码:1021 / 1026
页数:6
相关论文
共 54 条
[1]   Kinetics of conformational fluctuations in DNA hairpin-loops [J].
Bonnet, G ;
Krichevsky, O ;
Libchaber, A .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (15) :8602-8606
[2]   Thermodynamic basis of the enhanced specificity of structured DNA probes [J].
Bonnet, G ;
Tyagi, S ;
Libchaber, A ;
Kramer, FR .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (11) :6171-6176
[3]   Visualizing the distribution and transport of mRNAs in living cells [J].
Bratu, DP ;
Cha, BJ ;
Mhlanga, MM ;
Kramer, FR ;
Tyagi, S .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (23) :13308-13313
[4]   Preparation and characterization of graphene oxide paper [J].
Dikin, Dmitriy A. ;
Stankovich, Sasha ;
Zimney, Eric J. ;
Piner, Richard D. ;
Dommett, Geoffrey H. B. ;
Evmenenko, Guennadi ;
Nguyen, SonBinh T. ;
Ruoff, Rodney S. .
NATURE, 2007, 448 (7152) :457-460
[5]   Single-mismatch detection using gold-quenched fluorescent oligonucleotides [J].
Dubertret, B ;
Calame, M ;
Libchaber, AJ .
NATURE BIOTECHNOLOGY, 2001, 19 (04) :365-370
[6]   Selective colorimetric detection of polynucleotides based on the distance-dependent optical properties of gold nanoparticles [J].
Elghanian, R ;
Storhoff, JJ ;
Mucic, RC ;
Letsinger, RL ;
Mirkin, CA .
SCIENCE, 1997, 277 (5329) :1078-1081
[7]   Beyond superquenching: Hyper-efficient energy transfer from conjugated polymers to gold nanoparticles [J].
Fan, CH ;
Wang, S ;
Hong, JW ;
Bazan, GC ;
Plaxco, KW ;
Heeger, AJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (11) :6297-6301
[8]   Designing a novel molecular beacon for surface-immobilized DNA hybridization studies [J].
Fang, XH ;
Liu, XJ ;
Schuster, S ;
Tan, WH .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1999, 121 (12) :2921-2922
[9]   A Graphene Nanoprobe for Rapid, Sensitive, and Multicolor Fluorescent DNA Analysis [J].
He, Shijiang ;
Song, Bo ;
Li, Di ;
Zhu, Changfeng ;
Qi, Wenpeng ;
Wen, Yanqin ;
Wang, Lihua ;
Song, Shiping ;
Fang, Haiping ;
Fan, Chunhai .
ADVANCED FUNCTIONAL MATERIALS, 2010, 20 (03) :453-459
[10]   DNA microarray technology: Devices, systems, and applications [J].
Heller, MJ .
ANNUAL REVIEW OF BIOMEDICAL ENGINEERING, 2002, 4 :129-153