Next-generation sequencing yields mitochondrial genome of Coccidophilus cariba Gordon (Coleoptera: Coccinellidae) from museum specimen

被引：10

作者：

Nattier, Romain ^{[1
]}

Salazar, Karen ^{[1
,2
]}

机构：

[1] Sorbonne Univ, Univ Antilles, EPHE, Inst Systemat Evolut Biodiversite,ISYEB,CNRS,MNHN, Paris, France

[2] Univ Nacl Colombia, Inst Ciencias Nat, Grp Inverst Insectos Colombia, Bogota, Colombia

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期

关键词：

Illumina; ladybird; Microweiseinae; mitogenome; phylogeny; IQ-TREE;

D O I：

10.1080/23802359.2019.1679684

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

We assembled and annotated the first complete mitochondrial genome of a species from the subfamily Microweiseinae, Coccidophilus cariba Gordon, a predator of scale insect pest. The circular mitogenome consists of 15,343?bp in length, including 13 PCGs, 22 tRNA, and 2 rRNA genes, and exhibits the typical ladybird mitogenome structure. A phylogenetic analysis with the published mitogenomes of other 12 ladybirds is presented, which confirms the position of Microweiseinae as a sister group of Coccinellinae. The C. cariba mitogenome could be a useful source to future studies in the relationships inside the subfamily and the genus.

引用

页码：3780 / 3781

页数：2

共 12 条

[1]

[Anonymous], 2002, AM BEETLES

[2] MITOS: Improved de novo metazoan mitochondrial genome annotation [J].

Bernt, Matthias ;

Donath, Alexander ;

Juehling, Frank ;

Externbrink, Fabian ;

Florentz, Catherine ;

Fritzsch, Guido ;

Puetz, Joern ;

Middendorf, Martin ;

Stadler, Peter F. .

MOLECULAR PHYLOGENETICS AND EVOLUTION, 2013, 69 (02) :313-319

[3] DNA Extraction from Dry Museum Beetles without Conferring External Morphological Damage [J].

Gilbert, M. Thomas P. ;

Moore, Wendy ;

Melchior, Linea ;

Worobey, Michael .

PLOS ONE, 2007, 2 (03)

[4]

GORDON R D, 1978, Coleopterists Bulletin, V32, P205

[5] MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability [J].

Katoh, Kazutaka ;

Standley, Daron M. .

MOLECULAR BIOLOGY AND EVOLUTION, 2013, 30 (04) :772-780

[6] MBE Citation Classics (2018 Edition) [J].

Kumar, Sudhir ;

Rowe, Heather .

MOLECULAR BIOLOGY AND EVOLUTION, 2018, 35 (01) :1-2

[7]

Meyer Matthias, 2010, Cold Spring Harb Protoc, V2010, DOI 10.1101/pdb.prot5448

[8] IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies [J].

Lam-Tung Nguyen ;

Schmidt, Heiko A. ;

von Haeseler, Arndt ;

Bui Quang Minh .

MOLECULAR BIOLOGY AND EVOLUTION, 2015, 32 (01) :268-274

[9] Phylogeny and classification of Cucujoidea and the recognition of a new superfamily Coccinelloidea (Coleoptera: Cucujiformia) [J].

Robertson, James A. ;

Slipinski, Adam ;

Moulton, Matthew ;

Shockley, Floyd W. ;

Giorgi, Adriano ;

Lord, Nathan P. ;

Mckenna, Duane D. ;

Tomaszewska, Wioletta ;

Forrester, Juanita ;

Miller, Kelly B. ;

Whiting, Michael F. ;

Mchugh, Joseph V. .

SYSTEMATIC ENTOMOLOGY, 2015, 40 (04) :745-778

[10] Phylogeny, classification and evolution of ladybird beetles (Coleoptera: Coccinellidae) based on simultaneous analysis of molecular and morphological data [J].

Seago, Ainsley E. ;

Giorgi, Jose Adriano ;

Li, Jiahui ;

Slipinski, Adam .

MOLECULAR PHYLOGENETICS AND EVOLUTION, 2011, 60 (01) :137-151

← 1 2 →