Genetic algorithm optimization of defect clusters in crystalline materials

被引:23
作者
Kaczmarowski, Amy [1 ]
Yang, Shujiang [1 ]
Szlufarska, Izabela [1 ,2 ]
Morgan, Dane [1 ,2 ]
机构
[1] Univ Wisconsin, Mat Sci Program, Madison, WI 53706 USA
[2] Univ Wisconsin, Dept Mat Sci & Engn, Madison, WI 53706 USA
基金
美国国家科学基金会;
关键词
Genetic algorithm; Defects; Silicon carbide; Iron; Iron-chromium; Structural optimization; SELF-INTERSTITIAL CLUSTERS; AB-INITIO; STRUCTURE PREDICTION; EVOLUTIONARY TECHNIQUES; INTERATOMIC POTENTIALS; GEOMETRY OPTIMIZATION; ENERGY; ENERGETICS; STABILITY; IRON;
D O I
10.1016/j.commatsci.2014.10.062
中图分类号
T [工业技术];
学科分类号
08 ;
摘要
A real-space genetic algorithm for the optimization of defect structures embedded in bulk crystalline materials is developed. The purpose of this method is to enable automated prediction of stable structures for a range of embedded clusters, including radiation induced defect clusters, dopant clusters, and small precipitates. The method is applied to the prediction of small interstitial clusters in cubic SiC, BCC Fe, and BCC Fe-Cr random alloys for radiation damage applications. The performance of the method is analyzed and compared to alternative techniques such as basin hopping. The technique is able to reproduce smallsize defects that had been previously identified as stable or metastable structures as well as predict new mid-size defects. The structure optimization program (StructOpt) developed in this study is available under open source licensing as part of the MAterials Simulation Toolkit (MAST) and can be obtained from https://pypi.python.org/pypi/MAST. (C) 2014 Elsevier B.V. All rights reserved.
引用
收藏
页码:234 / 244
页数:11
相关论文
共 93 条
[1]   Development of an interatomic potential for phosphorus impurities in α-iron [J].
Ackland, GJ ;
Mendelev, MI ;
Srolovitz, DJ ;
Han, S ;
Barashev, AV .
JOURNAL OF PHYSICS-CONDENSED MATTER, 2004, 16 (27) :S2629-S2642
[2]   Elemental vacancy diffusion database from high-throughput first-principles calculations for fcc and hcp structures [J].
Angsten, Thomas ;
Mayeshiba, Tam ;
Wu, Henry ;
Morgan, Dane .
NEW JOURNAL OF PHYSICS, 2014, 16
[3]  
Averback RS, 1998, SOLID STATE PHYS, V51, P281
[4]   An object-oriented scripting interface to a legacy electronic structure code [J].
Bahn, SR ;
Jacobsen, KW .
COMPUTING IN SCIENCE & ENGINEERING, 2002, 4 (03) :56-66
[5]   Structures, stabilities and ordering in Ni-Al nanoalloy clusters [J].
Bailey, MS ;
Wilson, NT ;
Roberts, C ;
Johnston, RL .
EUROPEAN PHYSICAL JOURNAL D, 2003, 25 (01) :41-55
[6]   Structure of large gold clusters obtained by global optimization using the minima hopping method [J].
Bao, Kuo ;
Goedecker, Stefan ;
Koga, Kenji ;
Lancon, Frederic ;
Neelov, Alexey .
PHYSICAL REVIEW B, 2009, 79 (04)
[7]  
BOCKSTEDTE M, 2004, PHYS REV B, V69, P1
[8]   Evolution of energetics and bonding of compact self-interstitial clusters in Si [J].
Bongiorno, A ;
Colombo, L ;
Cargnoni, F ;
Gatti, C ;
Rosati, M .
EUROPHYSICS LETTERS, 2000, 50 (05) :608-614
[9]   Evolutionary approach for finding the atomic structure of steps on stable crystal surfaces [J].
Briggs, Ryan M. ;
Ciobanu, Cristian V. .
PHYSICAL REVIEW B, 2007, 75 (19)
[10]  
Chua ALS, 2010, NAT MATER, V9, P418, DOI [10.1038/nmat2712, 10.1038/NMAT2712]