Addition of poly(A) and poly(A)-rich tails during RNA degradation in the cytoplasm of human cells

被引:46
作者
Slomovic, Shimyn [1 ]
Fremder, Ella [1 ]
Staals, Raymond H. G. [2 ]
Pruijn, Ger J. M. [2 ]
Schuster, Gadi [1 ]
机构
[1] Technion Israel Inst Technol, Fac Biol, IL-32000 Haifa, Israel
[2] Radboud Univ Nijmegen, Inst Mol & Mat, Dept Biomol Chem, Nijmegen Ctr Mol Life Sci, NL-6525 GA Nijmegen, Netherlands
基金
以色列科学基金会;
关键词
exosome; heteropolymeric tails; RNA polyadenylation; HUMAN POLYNUCLEOTIDE PHOSPHORYLASE; CRYPTIC UNSTABLE TRANSCRIPTS; MESSENGER-RNA; QUALITY-CONTROL; BIDIRECTIONAL PROMOTERS; EXOSOME; DECAY; REQUIRES; OLIGOURIDYLATION; POLYADENYLATION;
D O I
10.1073/pnas.0910621107
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Polyadenylation of RNA is a posttranscriptional modification that can play two somewhat opposite roles: stable polyadenylation of RNA encoded in the nuclear genomes of eukaryote cells contributes to nuclear export, translation initiation, and possibly transcript longevity as well. Conversely, transient polyadenylation targets RNA molecules to rapid exonucleolytic degradation. The latter role has been shown to take place in prokaryotes and organelles, as well as the nucleus of eukaryotic cells. Here we present evidence of hetero- and homopolymeric adenylation of truncated RNA molecules within the cytoplasm of human cells. RNAi-mediated silencing of the major RNA decay machinery of the cell resulted in the accumulation of these polyadenylated RNA fragments, indicating that they are degradation intermediates. Together, these results suggest that a mechanism of RNA decay, involving transient polyadenylation, is present in the cytoplasm of human cells.
引用
收藏
页码:7407 / 7412
页数:6
相关论文
共 41 条
[1]   Termination of cryptic unstable transcripts is directed by yeast RNA-Binding proteins Nrd1 and Nab3 [J].
Arigo, John T. ;
Eyler, Daniel E. ;
Carroll, Kristina L. ;
Corden, Jeffry L. .
MOLECULAR CELL, 2006, 23 (06) :841-851
[2]   Vaccinia virus transcription [J].
Broyles, SS .
JOURNAL OF GENERAL VIROLOGY, 2003, 84 :2293-2303
[3]   Human polynucleotide phosphorylase: location matters [J].
Chen, Hsiao-Wen ;
Koehler, Carla M. ;
Teitell, Michael A. .
TRENDS IN CELL BIOLOGY, 2007, 17 (12) :600-608
[4]   Degradation of RNA in bacteria: comparison of mRNA and stable RNA [J].
Deutscher, MP .
NUCLEIC ACIDS RESEARCH, 2006, 34 (02) :659-666
[5]   RNA quality control in eukaryotes [J].
Doma, Meenakshi K. ;
Parker, Roy .
CELL, 2007, 131 (04) :660-668
[6]   A single subunit, Dis3, is essentially responsible for yeast exosome core activity [J].
Dziembowski, Andrzej ;
Lorentzen, Esben ;
Conti, Elena ;
Seraphin, Bertrand .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2007, 14 (01) :15-22
[7]   A history of poly A sequences: From formation to factors to function [J].
Edmonds, M .
PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY, VOL 71, 2002, 71 :285-389
[8]   The highways and byways of mRNA decay [J].
Garneau, Nicole L. ;
Wilusz, Jeffrey ;
Wilusz, Carol J. .
NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2007, 8 (02) :113-126
[9]   TUT4 in Concert with Lin28 Suppresses MicroRNA Biogenesis through Pre-MicroRNA Uridylation [J].
Heo, Inha ;
Joo, Chirlmin ;
Kim, Young-Kook ;
Ha, Minju ;
Yoon, Mi-Jeong ;
Cho, Jun ;
Yeom, Kyu-Hyeon ;
Han, Jinju ;
Kim, V. Narry .
CELL, 2009, 138 (04) :696-708
[10]   The Many Pathways of RNA Degradation [J].
Houseley, Jonathan ;
Tollervey, David .
CELL, 2009, 136 (04) :763-776