Signaling via the NFκB system

被引:897
作者
Mitchell, Simon
Vargas, Jesse
Hoffmann, Alexander [1 ]
机构
[1] Univ Calif Los Angeles, Dept Microbiol Immunol & Mol Genet, Los Angeles, CA USA
关键词
SELECTIVE GENE ACTIVATION; TRANSCRIPTION FACTORS; NF-KAPPA-B2; P100; GENOTOXIC STRESS; TEMPORAL CONTROL; KINASE-ACTIVITY; IKK-ALPHA; NUCLEAR-LOCALIZATION; MEDIATED ACTIVATION; NEGATIVE FEEDBACK;
D O I
10.1002/wsbm.1331
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
The nuclear factor kappa B (NFB) family of transcription factors is a key regulator of immune development, immune responses, inflammation, and cancer. The NFB signaling system (defined by the interactions between NFB dimers, IB regulators, and IKK complexes) is responsive to a number of stimuli, and upon ligand-receptor engagement, distinct cellular outcomes, appropriate to the specific signal received, are set into motion. After almost three decades of study, many signaling mechanisms are well understood, rendering them amenable to mathematical modeling, which can reveal deeper insights about the regulatory design principles. While other reviews have focused on upstream, receptor proximal signaling (Hayden MS, Ghosh S. Signaling to NF-B. Genes Dev 2004, 18:2195-2224; Verstrepen L, Bekaert T, Chau TL, Tavernier J, Chariot A, Beyaert R. TLR-4, IL-1R and TNF-R signaling to NF-B: variations on a common theme. Cell Mol Life Sci 2008, 65:2964-2978), and advances through computational modeling (Basak S, Behar M, Hoffmann A. Lessons from mathematically modeling the NF-B pathway. Immunol Rev 2012, 246:221-238; Williams R, Timmis J, Qwarnstrom E. Computational models of the NF-KB signalling pathway. Computation 2014, 2:131), in this review we aim to summarize the current understanding of the NFB signaling system itself, the molecular mechanisms, and systems properties that are key to its diverse biological functions, and we discuss remaining questions in the field. WIREs Syst Biol Med 2016, 8:227-241. doi: 10.1002/wsbm.1331 For further resources related to this article, please visit the .
引用
收藏
页码:227 / 241
页数:15
相关论文
共 122 条
[1]   Ubiquitin-mediated activation of TAK1 and IKK [J].
Adhikari, A. ;
Xu, M. ;
Chen, Z. J. .
ONCOGENE, 2007, 26 (22) :3214-3226
[2]   STIMULATION-DEPENDENT I-KAPPA-B-ALPHA PHOSPHORYLATION MARKS THE NF-KAPPA-B INHIBITOR FOR DEGRADATION VIA THE UBIQUITIN-PROTEASOME PATHWAY [J].
ALKALAY, I ;
YARON, A ;
HATZUBAI, A ;
ORIAN, A ;
CIECHANOVER, A ;
BEN-NERIAH, Y .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1995, 92 (23) :10599-10603
[3]   A Pathway Switch Directs BAFF Signaling to Distinct NFκB Transcription Factors in Maturing and Proliferating B Cells [J].
Almaden, Jonathan V. ;
Tsui, Rachel ;
Liu, Yi C. ;
Birnbaum, Harry ;
Shokhirev, Maxim N. ;
Ngo, Kim A. ;
Davis-Turak, Jeremy C. ;
Otero, Dennis ;
Basak, Soumen ;
Rickert, Robert C. ;
Hoffmann, Alexander .
CELL REPORTS, 2014, 9 (06) :2098-2111
[4]   IκBε Is a Key Regulator of B Cell Expansion by Providing Negative Feedback on cRel and RelA in a Stimulus-Specific Manner [J].
Alves, Bryce N. ;
Tsui, Rachel ;
Almaden, Jonathan ;
Shokhirev, Maxim N. ;
Davis-Turak, Jeremy ;
Fujimoto, Jessica ;
Birnbaum, Harry ;
Ponomarenko, Julia ;
Hoffmann, Alexander .
JOURNAL OF IMMUNOLOGY, 2014, 192 (07) :3121-3132
[5]   Stimulus-selective crosstalk via the NF-κB signaling system reinforces innate immune response to alleviate gut infection [J].
Banoth, Balaji ;
Chatterjee, Budhaditya ;
Vijayaragavan, Bharath ;
Prasad, M. V. R. ;
Roy, Payel ;
Basak, Soumen .
ELIFE, 2015, 4 :1-56
[6]   Crosstalk via the NF-κB signaling system [J].
Basak, Soumen ;
Hoffmann, Alexander .
CYTOKINE & GROWTH FACTOR REVIEWS, 2008, 19 (3-4) :187-197
[7]   Generation and activation of multiple dimeric transcription factors within the NF-κB signaling system [J].
Basak, Soumen ;
Shih, Vincent Feng-Sheng ;
Hoffmann, Alexander .
MOLECULAR AND CELLULAR BIOLOGY, 2008, 28 (10) :3139-3150
[8]   A fourth IκB protein within the NF-κB signaling module [J].
Basak, Soumen ;
Kim, Hana ;
Kearns, Jeffrey D. ;
Tergaonkar, Vinay ;
O'Dea, Ellen ;
Werner, Shannon L. ;
Benedict, Chris A. ;
Ware, Carl F. ;
Ghosh, Gourisankar ;
Verma, Inder M. ;
Hoffmann, Alexander .
CELL, 2007, 128 (02) :369-381
[9]   Lessons from mathematically modeling the NF-κB pathway [J].
Basak, Soumen ;
Behar, Marcelo ;
Hoffmann, Alexander .
IMMUNOLOGICAL REVIEWS, 2012, 246 :221-238
[10]   OPINION Is NF-κB a good target for cancer therapy? Hopes and pitfalls [J].
Baud, Veronique ;
Karin, Michael .
NATURE REVIEWS DRUG DISCOVERY, 2009, 8 (01) :33-40