Maribacter lutimaris sp nov., isolated from marine sediment

被引:15
作者
Kim, Kyung Hyun [1 ]
Jin, Hyun Mi [1 ,2 ]
Jeong, Hye Im [1 ]
Jeon, Che Ok [1 ]
机构
[1] Chung Ang Univ, Dept Life Sci, Seoul 06974, South Korea
[2] Nakdonggang Natl Inst Biol Resources, Freshwater Bioresources Utilizat Div, Gyeongsangbuk Do 37242, South Korea
关键词
EMENDED DESCRIPTION; SEA-WATER; GEN; NOV; FLAVOBACTERIACEAE; CULTURE; FAMILY;
D O I
10.1099/ijsem.0.000942
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-staining-negative, moderately halophilic and strictly aerobic bacterium, designated strain KJ4(T), was isolated from marine sediment at Gangjin in South Korea. Cells were catalaseand oxidase-positive long rods with gliding motility. Growth of strain KJ4(T) was observed at 4-37 degrees C (optimum, 15-25 degrees C), at pH 6.0-9.0 (optimum, pH 7.0-8.5) and in the presence of 1.0-7.0 % (w/v) NaCl (optimum, 2.0-5.0 %). Menaquinone 6 (MK-6) was the only isoprenoid quinone detected and iso-C-15 : 0, iso-C-17 : 0 3-OH, iso-C-15 : 1 G and summed feature 3 (comprising C-16 : 1 omega 7c and/or C-16 : 1 omega 6c) were the major cellular fatty acids. The polar lipids of strain KJ4(T) consisted of phosphatidylethanolamine, an unidentified aminophospholipid and five unidentified lipids. The G+ C content of the genomic DNA was 38.0 mol%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain KJ4(T) formed a distinct phylogenetic lineage within the genus Maribacter. Strain KJ4(T) was most closely related to Maribacter orientalis KMM 3947(T) with 97.4 % 16S rRNA gene sequence similarity. On the basis of phenotypic, chemotaxonomic and molecular features, strain KJ4(T) clearly represents a novel species of the genus Maribacter, for which the name Maribacter lutimaris sp. nov. is proposed. The type strain is KJ4(T) (=KACC 16438(T) =JCM 31154(T)).
引用
收藏
页码:1773 / 1778
页数:6
相关论文
共 32 条
[11]   Alteromonas As a Key Agent of Polycyclic Aromatic Hydrocarbon Biodegradation in Crude Oil-Contaminated Coastal Sediment [J].
Jin, Hyun Mi ;
Kim, Jeong Myeong ;
Lee, Hyo Jung ;
Madsen, Eugene L. ;
Jeon, Che Ok .
ENVIRONMENTAL SCIENCE & TECHNOLOGY, 2012, 46 (14) :7731-7740
[12]   Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes [J].
Kim, Mincheol ;
Oh, Hyun-Seok ;
Park, Sang-Cheol ;
Chun, Jongsik .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2014, 64 :346-351
[13]   Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species [J].
Kim, Ok-Sun ;
Cho, Yong-Joon ;
Lee, Kihyun ;
Yoon, Seok-Hwan ;
Kim, Mincheol ;
Na, Hyunsoo ;
Park, Sang-Cheol ;
Jeon, Yoon Seong ;
Lee, Jae-Hak ;
Yi, Hana ;
Won, Sungho ;
Chun, Jongsik .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2012, 62 :716-721
[14]  
KOMAGATA K, 1987, METHOD MICROBIOL, V19, P161
[15]  
LANYI B, 1987, METHOD MICROBIOL, V19, P1
[16]   Maribacter aestuarii sp nov., isolated from tidal flat sediment, and an emended description of the genus Maribacter [J].
Lo, Naysim ;
Jin, Hyun Mi ;
Jeon, Che Ok .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2013, 63 :3409-3414
[17]   Taxonomy of Antarctic Flavobacterium species:: description of Flavobacterium gillisiae sp nov., Flavobacterium tegetincola sp nov and Flavobacterium xanthum sp nov., nom. rev. and reclassification of [Flavobacterium] salegens as Salegentibacter salegens gen. nov., comb. nov. [J].
McCammon, SA ;
Bowman, JP .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2000, 50 :1055-1063
[18]   POLAR LIPID-COMPOSITION IN CLASSIFICATION OF NOCARDIA AND RELATED BACTERIA [J].
MINNIKIN, DE ;
PATEL, PV ;
ALSHAMAONY, L ;
GOODFELLOW, M .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1977, 27 (02) :104-117
[19]   Query-dependent banding (QDB) for faster RNA similarity searches [J].
Nawrocki, Eric P. ;
Eddy, Sean R. .
PLOS COMPUTATIONAL BIOLOGY, 2007, 3 (03) :540-554
[20]  
Nedashkovskaya O. I., 2011, BERGEYS MANUAL SYSTE, V4, P235