The dye methyl red was used to distinguish concomitant polymorphs of the matrix-assisted laser desorption ionization mass spectrometry (MALDI-MS) host, 2,5-dihydroxybenzoic acid. Red and purple crystals were readily separated by inspection. They corresponded to the known Form I (P2(1)/c, a = 4.9110(3) angstrom, b = 11.8280(7) angstrom, c = 11.0580(6) angstrom, beta = 91.059(3)degrees, V = 642.22 angstrom(3)) and Form II (P2(1)/c, a = 5.5610(2) angstrom, b = 4.8690(1) angstrom, c = 23.6880 (8) angstrom, beta = 100.191(1)degrees, V = 631.27 angstrom(3)), respectively. X-ray structures of cocrystals of dihydroxybenzoic acids and methyl red, measurements of the linear dichroism of mixed crystals, and force-field calculations were used to investigate the mechanism of differential coloring. The relevance of the observations to investigations of the MALDI mechanism are discussed.