A global profile of germline gene expression in C-elegans

被引:472
|
作者
Reinke, V
Smith, HE
Nance, J
Wang, J
Van Doren, C
Begley, R
Jones, SJM
Davis, EB
Scherer, S
Ward, S
Kim, SK [1 ]
机构
[1] Univ Arizona, Dept Mol & Cellular Biol, Tucson, AZ 85721 USA
[2] Stanford Univ, Med Ctr, Sch Med, Dept Dev Biol, Stanford, CA 94305 USA
[3] Rosetta Inpharmat, Kirkland, WA 98034 USA
[4] British Columbia Canc Res Ctr, Genome Sequence Ctr, Vancouver, BC V5Z 1L3, Canada
关键词
D O I
10.1016/S1097-2765(00)00059-9
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We used DNA microarrays to profile gene expression patterns in the C. elegans germline and identified 1416 germline-enriched transcripts that define three groups. The sperm-enriched group contains an unusually large number of protein kinases and phosphatases. The oocyte-enriched group includes potentially new components of embryonic signaling pathways. The germline-intrinsic group, defined as genes expressed similarly in germlines making only sperm or only oocytes, contains a family of piwi-related genes that may be important for stem cell proliferation. Finally, examination of the chromosomal location of germline transcripts revealed that sperm-enriched and germline-intrinsic genes are nearly absent from the X chromosome, but oocyte-enriched genes are not.
引用
收藏
页码:605 / 616
页数:12
相关论文
共 50 条
  • [41] C-elegans germline RNA helicases: Are they all components of the P granules?
    Kuznicki, K
    Gruidl, M
    Smith, P
    McCrone, S
    Bennett, K
    DEVELOPMENTAL BIOLOGY, 1996, 175 (02) : C14 - C14
  • [42] Distal tip cell control of germline stem cells in C-elegans
    Crittenden, SL
    Petcherski, AG
    Wickens, MP
    Kimble, J
    DEVELOPMENTAL BIOLOGY, 2000, 222 (01) : 224 - 224
  • [43] The C-elegans expression pattern database: A beginning
    Hope, IA
    Albertson, DG
    Martinelli, SD
    Lynch, AS
    Sonnhammer, E
    Durbin, R
    TRENDS IN GENETICS, 1996, 12 (09) : 370 - 371
  • [44] Gene expression profiling of cells, tissues, and developmental stages of the nematode C-elegans
    McKay, SJ
    Johnsen, R
    Khattra, J
    Asano, J
    Baillie, DL
    Chan, S
    Dube, N
    Fang, L
    Goszczynski, B
    Ha, K
    Halfnight, E
    Hollebakken, R
    Huang, P
    Hung, K
    Jensen, V
    Jones, SJM
    Kai, H
    Li, D
    Mah, A
    Marra, M
    McGhee, J
    Newbury, R
    Pouzyrev, A
    Riddle, DL
    Sonnhammer, E
    Tian, H
    Tu, D
    Tyson, JR
    Vatcher, G
    Warner, A
    Wong, K
    Zhao, Z
    Moerman, DG
    COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY, 2003, 68 : 159 - 169
  • [45] Integrating interactome, phenome, and transcriptome mapping data for the C-elegans germline
    Walhout, AJM
    Reboul, J
    Shtanko, O
    Bertin, N
    Vaglio, P
    Ge, H
    Lee, H
    Doucette-Stamm, L
    Gunsalus, KC
    Schetter, AJ
    Morton, DG
    Kemphues, KJ
    Reinke, V
    Kim, SK
    Piano, F
    Vidal, M
    CURRENT BIOLOGY, 2002, 12 (22) : 1952 - 1958
  • [46] Translational repression restricts expression of the C-elegans Nanos homolog NOS-2 to the embryonic germline
    D'Agostino, I
    Merritt, C
    Chen, PL
    Seydoux, G
    Subramaniam, K
    DEVELOPMENTAL BIOLOGY, 2006, 292 (01) : 244 - 252
  • [47] Identification of gene expression changes in transgenic C-elegans overexpressing human α-synuclein
    Vartiainen, Suvi
    Pehkonen, Petri
    Lakso, Merja
    Nass, Richard
    Wong, Garry
    NEUROBIOLOGY OF DISEASE, 2006, 22 (03) : 477 - 486
  • [48] STRUCTURE AND EXPRESSION OF THE COLLAGEN GENES OF C-ELEGANS
    HIRSH, D
    COX, GN
    KRAMER, JM
    STINCHCOMB, D
    JEFFERSON, R
    ANNALS OF THE NEW YORK ACADEMY OF SCIENCES, 1985, 460 : 163 - 171
  • [49] Cell Cycle Analysis in the C-elegans Germline with the Thymidine Analog EdU
    Kocsisova, Zuzana
    Mohammad, Ariz
    Kornfeld, Kerry
    Schedl, Tim
    JOVE-JOURNAL OF VISUALIZED EXPERIMENTS, 2018, (140):
  • [50] Human serum amyloid A expression in C-elegans
    Westermark, G. T.
    Sponarova, J.
    Shariatpanahi, A. Vahdat
    Westermark, P.
    AMYLOID-JOURNAL OF PROTEIN FOLDING DISORDERS, 2010, 17 : 45 - 45