Development of 17 Novel Cross-Species Microsatellite Markers for Dabry's Sturgeon (Acipenser dabryanus) from Chinese Sturgeon (Acipenser sinensis) via Next-Generation Sequencing

被引：2
作者：
Hu, Yacheng [1 ,2 ]
Liu, Xueqing [1 ,2 ]
Yang, Jing [1 ,2 ]
Xiao, Kan [1 ,2 ]
Wang, Binzhong [1 ,2 ]
Du, Hejun [1 ,2 ]
机构：
[1] China Three Gorges Corp, Chinese Sturgeon Res Inst, Yichang 443100, Hubei, Peoples R China
[2] Hubei Key Lab Three Gorges Project Conservat Fish, Yichang 443100, Hubei, Peoples R China
来源：
PAKISTAN JOURNAL OF ZOOLOGY | 2019年 / 51卷 / 06期
关键词：
Microsatellite; Acipenser dabryanus; Genetic diversity; Development; Cross-species; LOCI;
D O I：
10.17582/journal.pjz/2019.51.6.sc4
中图分类号：
Q95 [动物学];
学科分类号：
071002 ;
摘要：
In this study, we report 17 novel cross-species microsatellite markers for Dabry's sturgeon via next-generation sequencing from Chinese sturgeon (Acipenser sinensis). The 17 microsatellites were polymorphic with 3 to 6 alleles per locus and the total number of alleles is 80. The mean expected heterozygosity (H-E, 0.506 to 0.781), observed heterozygosity (H-O, 0.542 to 1), Hardy-Weinberg departure value (d, -0.042 to 0.427), polymorphic information content (PIC, 0.482 to 0.753) and the ShannonWiener Diversity Indices (H', 0.827 to 1.565) of all the 17 polymorphic loci indicated a high level of informativeness. Those markers will be useful tool to study the genetic diversity of Dabry's sturgeon.
引用
收藏
页码：2381 / 2384
页数：4
相关论文
共 23 条
  • [1] Development of Twenty-Two Novel Cross-Species Microsatellite Markers for Amur sturgeon (Acipenser schrenckii) from Chinese Sturgeon (Acipenser sinensis) via next-Generation Sequencing
    Hu, Yacheng
    Liu, Xueqing
    Yang, Jing
    Xiao, Kan
    Wang, Binzhong
    Du, Hejun
    TURKISH JOURNAL OF FISHERIES AND AQUATIC SCIENCES, 2019, 19 (02) : 175 - 178
  • [2] Identification and characterization of seventeen novel microsatellite markers for Dabry's sturgeon (Acipenser dabryanus)
    Que, Yanfu
    Xu, Dongmei
    Shao, Ke
    Xu, Nian
    Li, Weitao
    Zhu, Bin
    JOURNAL OF GENETICS, 2015, 94 : E62 - E65
  • [3] Identification and characterization of seventeen novel microsatellite markers for Dabry’s sturgeon (Acipenser dabryanus)
    YANFU QUE
    DONGMEI XU
    KE SHAO
    NIAN XU
    WEITAO LI
    BIN ZHU
    Journal of Genetics, 2015, 94 : 62 - 65
  • [4] Development of 26 SNP markers in Dabry's sturgeon (Acipenser dabryanus) based on high-throughput sequencing
    Wang, Xiaodong
    Jing, Huifang
    Li, Jiuxuan
    Ma, Qingzhan
    Liu, Kan
    Song, Zhaobin
    CONSERVATION GENETICS RESOURCES, 2017, 9 (02) : 205 - 207
  • [5] Rapid development of polymorphic microsatellite markers for the Amur sturgeon (Acipenser schrenckii) using next-generation sequencing technology
    Li, L. M.
    Wei, L.
    Jiang, H. Y.
    Zhang, Y.
    Zhang, X. J.
    Yuan, L. H.
    Chen, J. P.
    GENETICS AND MOLECULAR RESEARCH, 2015, 14 (03) : 7910 - 7913
  • [6] Development of novel, cross-species microsatellite markers for Acropora corals using next-generation sequencing technology
    Shinzato, Chuya
    Yasuoka, Yuki
    Mungpakdee, Sutada
    Arakaki, Nana
    Fujie, Manabu
    Nakajima, Yuichi
    Satoh, Nori
    FRONTIERS IN MARINE SCIENCE, 2014, 1
  • [7] Development of 27 novel cross-species microsatellite markers for the endangered Hucho bleekeri using next-generation sequencing technology
    Ke Wang
    Shuhuan Zhang
    Dengqiang Wang
    Miaomiao Xin
    Jinming Wu
    Qingliang Sun
    Hao Du
    Chengyou Wang
    Jun Huang
    Qiwei Wei
    Conservation Genetics Resources, 2015, 7 : 263 - 267
  • [8] Development of microsatellite markers inBetula costata(Betulaceae) by next-generation sequencing and cross-species transferability test
    Lee, Min-Woo
    Lee, Jei-Wan
    Kim, Sang-Chul
    Ahn, Ji-Young
    MOLECULAR BIOLOGY REPORTS, 2020, 47 (08) : 6407 - 6415
  • [9] Development of 27 novel cross-species microsatellite markers for the endangered Hucho bleekeri using next-generation sequencing technology
    Wang, Ke
    Zhang, Shuhuan
    Wang, Dengqiang
    Xin, Miaomiao
    Wu, Jinming
    Sun, Qingliang
    Du, Hao
    Wang, Chengyou
    Huang, Jun
    Wei, Qiwei
    CONSERVATION GENETICS RESOURCES, 2015, 7 (01) : 263 - 267
  • [10] Development of Microsatellite Markers in Pungtungia herzi Using Next-Generation Sequencing and Cross-Species Amplification in the Genus Pseudopungtungia
    Yun, Young-Eun
    Yu, Jeong-Nam
    Kim, Sang Ki
    Hwang, Ui Wook
    Kwak, Myounghai
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2013, 14 (10): : 19923 - 19931
123