A minimalistic cyclic ice-binding peptide from phage display

被引:36
|
作者
Stevens, Corey A. [1 ,2 ]
Bachtiger, Fabienne [3 ,4 ]
Kong, Xu-Dong [5 ]
Abriata, Luciano A. [6 ,7 ,8 ]
Sosso, Gabriele C. [3 ,4 ]
Gibson, Matthew, I [3 ,4 ,9 ]
Klok, Harm-Anton [1 ,2 ]
机构
[1] Ecole Polytech Fed Lausanne EPFL, Lab Polymeres, Inst Mat, Lausanne, Switzerland
[2] Ecole Polytech Fed Lausanne EPFL, Inst Sci & Ingn Chim, Lausanne, Switzerland
[3] Univ Warwick, Dept Chem, Coventry, W Midlands, England
[4] Univ Warwick, Ctr Sci Comp, Coventry, W Midlands, England
[5] Ecole Polytech Fed Lausanne EPFL, Lab Therapeut Prot & Peptides, Inst Chem Sci & Engn, Lausanne, Switzerland
[6] Ecole Polytech Fed Lausanne EPFL, Prot Prod & Struct Core Facil, Lausanne, Switzerland
[7] Ecole Polytech Fed Lausanne EPFL, Lab Biomol Modeling, Lausanne, Switzerland
[8] Swiss Inst Bioinformat, Lausanne, Switzerland
[9] Univ Warwick, Warwick Med Sch, Coventry, W Midlands, England
基金
瑞士国家科学基金会; 英国工程与自然科学研究理事会;
关键词
ANTIFREEZE PROTEIN; RECRYSTALLIZATION;
D O I
10.1038/s41467-021-22883-w
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Developing molecules that emulate the properties of naturally occurring ice-binding proteins (IBPs) is a daunting challenge. Rather than relying on the (limited) existing structure-property relationships that have been established for IBPs, here we report the use of phage display for the identification of short peptide mimics of IBPs. To this end, an ice-affinity selection protocol is developed, which enables the selection of a cyclic ice-binding peptide containing just 14 amino acids. Mutational analysis identifies three residues, Asp8, Thr10 and Thr14, which are found to be essential for ice binding. Molecular dynamics simulations reveal that the side chain of Thr10 hydrophobically binds to ice revealing a potential mechanism. To demonstrate the biotechnological potential of this peptide, it is expressed as a fusion ('Ice-Tag') with mCherry and used to purify proteins directly from cell lysate. Developing molecules that emulate the properties of naturally occurring ice-binding proteins (IBPs) is a daunting challenge. Here, the authors demonstrate the use of phage display for the identification of short peptide mimics of IBPs, which resulted in the identification of a cyclic ice-binding peptide containing just 14 amino acids.
引用
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页数:8
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