Parasite Microbiome Project: Systematic Investigation of Microbiome Dynamics within and across Parasite-Host Interactions

被引：42

作者：

Dheilly, Nolwenn M. ^{[1
]}

Bolnick, Daniel ^{[2
]}

Bordenstein, Seth ^{[3
,4
,5
]}

Brindley, Paul J. ^{[6
]}

Figueres, Cedric ^{[1
]}

Holmes, Edward C. ^{[7
,8
]}

Martinez, Joaquin Martinez ^{[9
]}

Phillips, Anna J. ^{[10
]}

Poulin, Robert ^{[11
]}

Rosario, Karyna ^{[12
]}

机构：

[1] SUNY Stony Brook, Sch Marine & Atmospher Sci, Stony Brook, NY 11794 USA

[2] Univ Texas Austin, Dept Integrat Biol, Austin, TX 78712 USA

[3] Vanderbilt Univ, Vanderbilt Genet Inst, Vanderbilt Inst Infect Immunol & Inflammat, Dept Biol Sci & Pathol, 221 Kirkland Hall, Nashville, TN 37235 USA

[4] Vanderbilt Univ, Vanderbilt Genet Inst, Vanderbilt Inst Infect Immunol & Inflammat, Dept Microbiol, 221 Kirkland Hall, Nashville, TN 37235 USA

[5] Vanderbilt Univ, Vanderbilt Genet Inst, Vanderbilt Inst Infect Immunol & Inflammat, Dept Immunol, 221 Kirkland Hall, Nashville, TN 37235 USA

[6] George Washington Univ, Dept Microbiol Immunol & Trop Med, Res Ctr Neglected Dis Poverty, Sch Med & Hlth Sci, Washington, DC USA

[7] Univ Sydney, Marie Bashir Inst Infect Dis & Biosecur, Charles Perkins Ctr, Sch Life & Environm Sci, Sydney, NSW, Australia

[8] Univ Sydney, Sydney Med Sch, Sydney, NSW, Australia

[9] Bigelow Lab Ocean Sci, East Boothbay, ME USA

[10] Smithsonian Inst, Natl Museum Nat Hist, Dept Invertebrate Zool, Washington, DC 20560 USA

[11] Univ Otago, Dept Zool, Dunedin, New Zealand

[12] Univ S Florida, Coll Marine Sci, St Petersburg, FL 33701 USA

来源：

MSYSTEMS | 2017年 / 2卷 / 04期

关键词：

ecology; microbiome; parasitology; BACTERIA; VIRUS;

D O I：

10.1128/mSystems.00050-17

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

Understanding how microbiomes affect host resistance, parasite virulence, and parasite-associated diseases requires a collaborative effort between parasitologists, microbial ecologists, virologists, and immunologists. We hereby propose the Parasite Microbiome Project to bring together researchers with complementary expertise and to study the role of microbes in host-parasite interactions. Data from the Parasite Microbiome Project will help identify the mechanisms driving microbiome variation in parasites and infected hosts and how that variation is associated with the ecology and evolution of parasites and their disease outcomes. This is a call to arms to prevent fragmented research endeavors, encourage best practices in experimental approaches, and allow reliable comparative analyses across model systems. It is also an invitation to foundations and national funding agencies to propel the field of parasitology into the microbiome/ metagenomic era.

引用

页数：4

共 21 条

[1] A unified initiative to harness Earth's microbiomes [J].

Alivisatos, A. P. ;

Blaser, M. J. ;

Brodie, E. L. ;

Chun, M. ;

Dangl, J. L. ;

Donohue, T. J. ;

Dorrestein, P. C. ;

Gilbert, J. A. ;

Green, J. L. ;

Jansson, J. K. ;

Knight, R. ;

Maxon, M. E. ;

McFall-Ngai, M. J. ;

Miller, J. F. ;

Pollard, K. S. ;

Ruby, E. G. ;

Taha, S. A. .

SCIENCE, 2015, 350 (6260) :507-508

[2] Bacteria Associated with a Tree-Killing Insect Reduce Concentrations of Plant Defense Compounds [J].

Boone, Celia K. ;

Keefover-Ring, Ken ;

Mapes, Abigail C. ;

Adams, Aaron S. ;

Bohlmann, Joerg ;

Raffa, Kenneth F. .

JOURNAL OF CHEMICAL ECOLOGY, 2013, 39 (07) :1003-1006

[3] Tissue Microbiome Profiling Identifies an Enrichment of Specific Enteric Bacteria in Opisthorchis viverrini Associated Cholangiocarcinoma [J].

Chng, Kern Rei ;

Chan, Sock Hoai ;

Ng, Amanda Hui Qi ;

Li, Chenhao ;

Jusakul, Apinya ;

Bertrand, Denis ;

Wilm, Andreas ;

Choo, Su Pin ;

Tan, Damien Meng Yew ;

Lim, Kiat Hon ;

Soetinko, Roy ;

Ong, Choon Kiat ;

Duda, Dan G. ;

Dima, Simona ;

Popescu, Irinel ;

Wongkham, Chaisiri ;

Feng, Zhu ;

Yeoh, Khay Guan ;

Teh, Bin Tean ;

Yongvanit, Puangrat ;

Wongkham, Sopit ;

Bhudhisawasd, Vajaraphongsa ;

Khuntikeo, Narong ;

Tan, Patrick ;

Pairojkul, Chawalit ;

Ngeow, Joanne ;

Nagarajan, Niranjan .

EBIOMEDICINE, 2016, 8 :195-202

[4] Biological warfare: Microorganisms as drivers of host-parasite interactions [J].

Dheilly, Nolwenn M. ;

Poulin, Robert ;

Thomas, Frederic .

INFECTION GENETICS AND EVOLUTION, 2015, 34 :251-259

[5] Who is the puppet master? Replication of a parasitic wasp-associated virus correlates with host behaviour manipulation [J].

Dheilly, Nolwenn M. ;

Maure, Fanny ;

Ravallec, Marc ;

Galinier, Richard ;

Doyon, Josee ;

Duval, David ;

Leger, Lucas ;

Volkoff, Anne-Nathalie ;

Misse, Dorothee ;

Nidelet, Sabine ;

Demolombe, Vincent ;

Brodeur, Jacques ;

Gourbal, Benjamin ;

Thomas, Frederic ;

Mitta, Guillaume .

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2015, 282 (1803)

[6] Homage to Linnaeus: How many parasites? How many hosts? [J].

Dobson, Andy ;

Lafferty, Kevin D. ;

Kuris, Armand M. ;

Hechinger, Ryan F. ;

Jetz, Walter .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 :11482-11489

[7] Parasite-induced warning coloration: a novel form of host manipulation [J].

Fenton, Andy ;

Magoolagan, Lucy ;

Kennedy, Zara ;

Spencer, Karen A. .

ANIMAL BEHAVIOUR, 2011, 81 (02) :417-422

[8] Endobiont Viruses Sensed by the Human Host - Beyond Conventional Antiparasitic Therapy [J].

Fichorova, Raina N. ;

Lee, Yujin ;

Yamamoto, Hidemi S. ;

Takagi, Yuko ;

Hayes, Gary R. ;

Goodman, Russell P. ;

Chepa-Lotrea, Xenia ;

Buck, Olivia R. ;

Murray, Ryan ;

Kula, Tomasz ;

Beach, David H. ;

Singh, Bibhuti N. ;

Nibert, Max L. .

PLOS ONE, 2012, 7 (11)

[9] The Genomic Standards Consortium [J].

Field, Dawn ;

Amaral-Zettler, Linda ;

Cochrane, Guy ;

Cole, James R. ;

Dawyndt, Peter ;

Garrity, George M. ;

Gilbert, Jack ;

Gloeckner, Frank Oliver ;

Hirschman, Lynette ;

Karsch-Mizrachi, Ilene ;

Klenk, Hans-Peter ;

Knight, Rob ;

Kottmann, Renzo ;

Kyrpides, Nikos ;

Meyer, Folker ;

San Gil, Inigo ;

Sansone, Susanna-Assunta ;

Schriml, Lynn M. ;

Sterk, Peter ;

Tatusova, Tatiana ;

Ussery, David W. ;

White, Owen ;

Wooley, John .

PLOS BIOLOGY, 2011, 9 (06)

[10] A spirit of scientific rigour: Koch's postulates in twentieth-century medicine [J].

Gradmann, Christoph .

MICROBES AND INFECTION, 2014, 16 (11) :885-892

← 1 2 3 →