Chronic Obstructive Pulmonary Disease: Thoracic CT Texture Analysis and Machine Learnins to Predict Pulmonary Ventilation
被引:36
作者:
Westcott, Andrew
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机构:
Robarts Res Inst, London, ON, Canada
Western Univ, Dept Med Biophys, 1151 Richmond St N, London, ON N6A 5B7, CanadaRobarts Res Inst, London, ON, Canada
Westcott, Andrew
[1
,2
]
Capaldi, Dante P. I.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Radiat Oncol, Sch Med, Stanford, CA 94305 USARobarts Res Inst, London, ON, Canada
Capaldi, Dante P. I.
[5
]
McCormack, David G.
论文数: 0引用数: 0
h-index: 0
机构:
Western Univ, Div Respirol, Dept Med, 1151 Richmond St N, London, ON N6A 5B7, CanadaRobarts Res Inst, London, ON, Canada
McCormack, David G.
[3
]
Ward, Aaron D.
论文数: 0引用数: 0
h-index: 0
机构:
Western Univ, Dept Med Biophys, 1151 Richmond St N, London, ON N6A 5B7, Canada
Western Univ, Dept Oncol, 1151 Richmond St N, London, ON N6A 5B7, CanadaRobarts Res Inst, London, ON, Canada
Ward, Aaron D.
[2
,4
]
Fenster, Aaron
论文数: 0引用数: 0
h-index: 0
机构:
Robarts Res Inst, London, ON, Canada
Western Univ, Dept Med Biophys, 1151 Richmond St N, London, ON N6A 5B7, CanadaRobarts Res Inst, London, ON, Canada
Fenster, Aaron
[1
,2
]
Parraga, Grace
论文数: 0引用数: 0
h-index: 0
机构:
Robarts Res Inst, London, ON, Canada
Western Univ, Dept Med Biophys, 1151 Richmond St N, London, ON N6A 5B7, Canada
Western Univ, Div Respirol, Dept Med, 1151 Richmond St N, London, ON N6A 5B7, CanadaRobarts Res Inst, London, ON, Canada
Parraga, Grace
[1
,2
,3
]
机构:
[1] Robarts Res Inst, London, ON, Canada
[2] Western Univ, Dept Med Biophys, 1151 Richmond St N, London, ON N6A 5B7, Canada
[3] Western Univ, Div Respirol, Dept Med, 1151 Richmond St N, London, ON N6A 5B7, Canada
[4] Western Univ, Dept Oncol, 1151 Richmond St N, London, ON N6A 5B7, Canada
[5] Stanford Univ, Dept Radiat Oncol, Sch Med, Stanford, CA 94305 USA
Background: Fixed airflow limitation and ventilation heterogeneity are common in chronic obstructive pulmonary disease (COPD). Conventional noncontrast CT provides airway and parenchymal measurements but cannot be used to directly determine lung function. Purpose: To develop, train, and test a CT texture analysis and machine-learning algorithm to predict lung ventilation heterogeneity in participants with COPD. Materials and Methods: In this prospective study (ClinicalTrials.gov: NCT02723474; conducted from January 2010 to February 2017), participants were randomized to optimization (n = 1), training (n = 67), and testing (n = 27) data sets. Hyperpolarized (HP) heliumm 3 (He-3) MRI ventilation maps were co-registered with thoracic CT to provide ground truth labels, and 87 quantitative imaging features were extracted and normalized to lung averages to generate 174 features. The volume-of-interest dimension and the training data sampling method were optimized to maximize the area under the receiver operating characteristic curve (AUC). Forward feature selection was performed to reduce the number of features; logistic regression, linear support vector machine, and quadratic support vector machine classifiers were trained through fivefold cross validation. The highest-performing classification model was applied to the test data set. Pearson coefficients were used to determine the relationships between the model, MRI, and pulmonary function measurements. Results: The quadratic support vector machine performed best in training and was applied to the test data set. Model-predicted ventilation maps had an accuracy of 88% (95% confidence interval [CI]: 88%, 88%) and an AUC of 0.82 (95% CI: 0.82, 0.83) when the HP He-3 MRI ventilation maps were used as the reference standard. Model predicted ventilation defect percentage (VDP) was correlated with VDP at (HPHe)-He-3 MRI (r = 0.90, P < .001). Both model-predicted and HP He-3 MRI VDP were correlated with forced expiratory volume in 1 second (FEV1) (model: r = -0.65, P < .001; MRI: r = -0.70, P < .001), ratio of FEV1 to forced vital capacity (model: r = -0.73, P < .001; MRI: r = -0.75, P < .001), diffusing capacity ( model: r = - 0.69, P < .001; MRI: r = -0.65, P < .001), and quality-of-life score (model: r = 0.59, P = .001; MRI: r = 0.65, P < .001). Conclusion: Model-predicted ventilation maps generated by using CT textures and machine learning were correlated with MRI ventilation maps (r = 0.90, P < .001). (C) RSNA, 2019
机构:
Robarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
Univ Western Ontario, Dept Med Biophys, London, ON, CanadaRobarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
Capaldi, Dante P. I.
Zha, Nanxi
论文数: 0引用数: 0
h-index: 0
机构:
Robarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, CanadaRobarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
Zha, Nanxi
Guo, Fumin
论文数: 0引用数: 0
h-index: 0
机构:
Robarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
Univ Western Ontario, Grad Program Biomed Engn, London, ON, CanadaRobarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
Guo, Fumin
Pike, Damien
论文数: 0引用数: 0
h-index: 0
机构:
Robarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
Univ Western Ontario, Dept Med Biophys, London, ON, CanadaRobarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
Pike, Damien
McCormack, David G.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Western Ontario, Dept Med, Div Respirol, London, ON, CanadaRobarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
McCormack, David G.
Kirby, Miranda
论文数: 0引用数: 0
h-index: 0
机构:
St Pauls Hosp, Heart & Lung Inst, Vancouver, BC V6Z 1Y6, CanadaRobarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
Kirby, Miranda
Parraga, Grace
论文数: 0引用数: 0
h-index: 0
机构:
Robarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
Univ Western Ontario, Dept Med Biophys, London, ON, Canada
Univ Western Ontario, Grad Program Biomed Engn, London, ON, CanadaRobarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
机构:
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27514 USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
Couper, David
LaVange, Lisa M.
论文数: 0引用数: 0
h-index: 0
机构:
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27514 USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
LaVange, Lisa M.
Han, MeiLan
论文数: 0引用数: 0
h-index: 0
机构:
Univ Michigan, Div Pulm & Crit Care, Ann Arbor, MI 48109 USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
Han, MeiLan
Barr, R. Graham
论文数: 0引用数: 0
h-index: 0
机构:
Columbia Univ, Dept Med, New York, NY USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
Barr, R. Graham
Bleecker, Eugene
论文数: 0引用数: 0
h-index: 0
机构:
Wake Forest Univ, Ctr Genom & Personalized Med Res, Winston Salem, NC 27109 USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
Bleecker, Eugene
Hoffman, Eric A.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Iowa, Dept Radiol, Iowa City, IA 52242 USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
Hoffman, Eric A.
Kanner, Richard
论文数: 0引用数: 0
h-index: 0
机构:
Univ Utah, Dept Internal Med Pulm & Crit Care Med, Salt Lake City, UT USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
Kanner, Richard
Kleerup, Eric
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Los Angeles, Dept Med, Los Angeles, CA 90024 USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
Kleerup, Eric
Martinez, Fernando J.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Michigan, Dept Internal Med, Ann Arbor, MI 48109 USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
Martinez, Fernando J.
Woodruff, Prescott G.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Francisco, Dept Med, Div Pulm Crit Care Sleep & Allergy, San Francisco, CA USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
Woodruff, Prescott G.
Rennard, Stephen
论文数: 0引用数: 0
h-index: 0
机构:
Univ Nebraska, Dept Internal Med, Div Pulm Crit Care Sleep & Allergy, Omaha, NE 68182 USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
机构:
Univ S Florida, Coll Med, H Lee Moffitt Canc Ctr & Res Inst, Dept Canc Imaging, 12902 Magnolia Dr, Tampa, FL 33612 USAUniv S Florida, Coll Med, H Lee Moffitt Canc Ctr & Res Inst, Dept Canc Imaging, 12902 Magnolia Dr, Tampa, FL 33612 USA
Gillies, Robert J.
Kinahan, Paul E.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Dept Radiol, Seattle, WA 98195 USAUniv S Florida, Coll Med, H Lee Moffitt Canc Ctr & Res Inst, Dept Canc Imaging, 12902 Magnolia Dr, Tampa, FL 33612 USA
Kinahan, Paul E.
Hricak, Hedvig
论文数: 0引用数: 0
h-index: 0
机构:
Mem Sloan Kettering Canc Ctr, Dept Radiol, New York, NY 10065 USAUniv S Florida, Coll Med, H Lee Moffitt Canc Ctr & Res Inst, Dept Canc Imaging, 12902 Magnolia Dr, Tampa, FL 33612 USA
机构:
Robarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
Univ Western Ontario, Dept Med Biophys, London, ON, CanadaRobarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
Capaldi, Dante P. I.
Zha, Nanxi
论文数: 0引用数: 0
h-index: 0
机构:
Robarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, CanadaRobarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
Zha, Nanxi
Guo, Fumin
论文数: 0引用数: 0
h-index: 0
机构:
Robarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
Univ Western Ontario, Grad Program Biomed Engn, London, ON, CanadaRobarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
Guo, Fumin
Pike, Damien
论文数: 0引用数: 0
h-index: 0
机构:
Robarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
Univ Western Ontario, Dept Med Biophys, London, ON, CanadaRobarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
Pike, Damien
McCormack, David G.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Western Ontario, Dept Med, Div Respirol, London, ON, CanadaRobarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
McCormack, David G.
Kirby, Miranda
论文数: 0引用数: 0
h-index: 0
机构:
St Pauls Hosp, Heart & Lung Inst, Vancouver, BC V6Z 1Y6, CanadaRobarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
Kirby, Miranda
Parraga, Grace
论文数: 0引用数: 0
h-index: 0
机构:
Robarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
Univ Western Ontario, Dept Med Biophys, London, ON, Canada
Univ Western Ontario, Grad Program Biomed Engn, London, ON, CanadaRobarts Res Inst, Imaging Res Labs, 1151 Richmond St N, London, ON N6A 5B7, Canada
机构:
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27514 USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
Couper, David
LaVange, Lisa M.
论文数: 0引用数: 0
h-index: 0
机构:
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27514 USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
LaVange, Lisa M.
Han, MeiLan
论文数: 0引用数: 0
h-index: 0
机构:
Univ Michigan, Div Pulm & Crit Care, Ann Arbor, MI 48109 USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
Han, MeiLan
Barr, R. Graham
论文数: 0引用数: 0
h-index: 0
机构:
Columbia Univ, Dept Med, New York, NY USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
Barr, R. Graham
Bleecker, Eugene
论文数: 0引用数: 0
h-index: 0
机构:
Wake Forest Univ, Ctr Genom & Personalized Med Res, Winston Salem, NC 27109 USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
Bleecker, Eugene
Hoffman, Eric A.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Iowa, Dept Radiol, Iowa City, IA 52242 USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
Hoffman, Eric A.
Kanner, Richard
论文数: 0引用数: 0
h-index: 0
机构:
Univ Utah, Dept Internal Med Pulm & Crit Care Med, Salt Lake City, UT USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
Kanner, Richard
Kleerup, Eric
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Los Angeles, Dept Med, Los Angeles, CA 90024 USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
Kleerup, Eric
Martinez, Fernando J.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Michigan, Dept Internal Med, Ann Arbor, MI 48109 USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
Martinez, Fernando J.
Woodruff, Prescott G.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Francisco, Dept Med, Div Pulm Crit Care Sleep & Allergy, San Francisco, CA USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
Woodruff, Prescott G.
Rennard, Stephen
论文数: 0引用数: 0
h-index: 0
机构:
Univ Nebraska, Dept Internal Med, Div Pulm Crit Care Sleep & Allergy, Omaha, NE 68182 USAUniv N Carolina, Dept Biostat, Chapel Hill, NC 27514 USA
机构:
Univ S Florida, Coll Med, H Lee Moffitt Canc Ctr & Res Inst, Dept Canc Imaging, 12902 Magnolia Dr, Tampa, FL 33612 USAUniv S Florida, Coll Med, H Lee Moffitt Canc Ctr & Res Inst, Dept Canc Imaging, 12902 Magnolia Dr, Tampa, FL 33612 USA
Gillies, Robert J.
Kinahan, Paul E.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Dept Radiol, Seattle, WA 98195 USAUniv S Florida, Coll Med, H Lee Moffitt Canc Ctr & Res Inst, Dept Canc Imaging, 12902 Magnolia Dr, Tampa, FL 33612 USA
Kinahan, Paul E.
Hricak, Hedvig
论文数: 0引用数: 0
h-index: 0
机构:
Mem Sloan Kettering Canc Ctr, Dept Radiol, New York, NY 10065 USAUniv S Florida, Coll Med, H Lee Moffitt Canc Ctr & Res Inst, Dept Canc Imaging, 12902 Magnolia Dr, Tampa, FL 33612 USA