Software and database for the analysis of mutations in the VHL gene

被引:106
作者
Béroud, C
Joly, D
Gallou, C
Staroz, F
Orfanelli, MT
Junien, C
机构
[1] Univ Paris 05, Hop Necker Enfants Malad, INSERM, UR383, F-75745 Paris 15, France
[2] Hop Broussais, Serv Pharm, F-75674 Paris, France
关键词
D O I
10.1093/nar/26.1.256
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
VHL is a tumor suppressor gene localized on chromosome 3p25-26. Mutations of the VHL gene were described at first in the heritable von Hippel-Lindau disease and in the sporadic Renal Cell Carcinoma (RCC), More recently, VHL has also been shown to harbor mutations in mesothelioma and small cell lung carcinoma, To date more than 500 mutations have been identified, These mutations are mainly private with only one hot spot at codon 167 associated with pheochromocytoma, The germline mutations are essentially missense while somatic mutations include deletions, insertions and nonsense. To standardize the collection of these informations, facilitate the mutational analysis of the VHL gene and promote the genotype-phenotype analysis, a software package along with a computerized database have been created, The current database and the analysis software are accessible via the internet and world wide web interface at the URL: http://www.umd.necker.fr.
引用
收藏
页码:256 / 258
页数:3
相关论文
共 32 条
  • [1] SOMATIC MUTATIONS OF VON HIPPEL-LINDAU (VHL) TUMOR-SUPPRESSOR GENE IN EUROPEAN KIDNEY CANCERS
    BAILLY, M
    BAIN, C
    FAVROT, MC
    OZTURK, M
    [J]. INTERNATIONAL JOURNAL OF CANCER, 1995, 63 (05) : 660 - 664
  • [2] APC gene: Database of germline and somatic mutations in human tumors and cell lines
    Beroud, C
    Soussi, T
    [J]. NUCLEIC ACIDS RESEARCH, 1996, 24 (01) : 121 - 124
  • [3] p53 gene mutation: Software and database
    Beroud, C
    Verdier, F
    Soussi, T
    [J]. NUCLEIC ACIDS RESEARCH, 1996, 24 (01) : 147 - 150
  • [4] p53 gene mutation:: software and database
    Béroud, C
    Soussi, T
    [J]. NUCLEIC ACIDS RESEARCH, 1998, 26 (01) : 200 - 204
  • [5] BEROUD C, 1998, UNPUB
  • [6] VON HIPPEL-LINDAU (VHL) DISEASE WITH PHEOCHROMOCYTOMA IN THE BLACK-FOREST REGION OF GERMANY - EVIDENCE FOR A FOUNDER EFFECT
    BRAUCH, H
    KISHIDA, T
    GLAVAC, D
    CHEN, F
    PAUSCH, F
    HOFLER, H
    LATIF, F
    LERMAN, MI
    ZBAR, B
    NEUMANN, HPH
    [J]. HUMAN GENETICS, 1995, 95 (05) : 551 - 556
  • [7] GERMLINE MUTATIONS IN THE VONHIPPEL-LINDAU DISEASE TUMOR-SUPPRESSOR GENE - CORRELATIONS WITH PHENOTYPE
    CHEN, F
    KISHIDA, T
    YAO, M
    HUSTAD, T
    GLAVAC, D
    DEAN, M
    GNARRA, JR
    ORCUTT, ML
    DUH, FM
    GLENN, G
    GREEN, J
    HSIA, YE
    LAMIELL, J
    LI, H
    WEI, MH
    SCHMIDT, L
    TORY, K
    KUZMIN, I
    STACKHOUSE, T
    LATIF, F
    LINEHAN, WM
    LERMAN, M
    ZBAR, B
    [J]. HUMAN MUTATION, 1995, 5 (01) : 66 - 75
  • [8] Software and database for the analysis of mutations in the human FBN1 gene
    Collod, G
    Beroud, C
    Soussi, T
    Junien, C
    Boileau, C
    [J]. NUCLEIC ACIDS RESEARCH, 1996, 24 (01) : 137 - 140
  • [9] CROSSEY PA, 1994, HUM MOL GENET, V3, P1303
  • [10] INHIBITION OF TRANSCRIPTION ELONGATION BY THE VHL TUMOR-SUPPRESSOR PROTEIN
    DUAN, DR
    PAUSE, A
    BURGESS, WH
    ASO, T
    CHEN, DYT
    GARRETT, KP
    CONAWAY, RC
    CONAWAY, JW
    LINEHAN, WM
    KLAUSNER, RD
    [J]. SCIENCE, 1995, 269 (5229) : 1402 - 1406