The first complete mitochondrial genome of the Microtus ochrogaster

被引:6
|
作者
Cao, Wei [1 ,2 ]
Xia, Yan [3 ]
Dang, Xiao [3 ]
Xu, Qiwu [3 ]
机构
[1] Shanghai Jiao Tong Univ, Sch Biomed Engn, 1954 Huashan Rd, Shanghai 200030, Peoples R China
[2] Shanghai Jiao Tong Univ, Med Res Inst X, 1954 Huashan Rd, Shanghai 200030, Peoples R China
[3] Univ Chinese Acad Sci, BGI Educ Ctr, Shenzhen, Peoples R China
关键词
Microtus ochrogaster; mitogenome; phylogenetic; RODENTIA;
D O I
10.3109/19401736.2015.1079854
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Microtus ochrogaster, a small vole, found in central North America. Recently the genome sequencing had been done, but no more information of its mitochondrial reported. Herein, we first assembled the complete mitochondrial genome sequence of Microtus ochrogaster. It is a 16 292 bp long sequence with most mitogenome's characteristic structure, 13 protein-coding genes, two of rRNA genes, 22 of tRNA genes, one D-loop region, one repeat region, and three STS regions. The GC-content of our fresh sequence is 40%. It can verify the accuracy and utility of new determined mitogenome sequences by the phylogenetic analysis, based on the whole mitogenome alignment with Microtus fortis calamorum, Microtus levis, and Microtus rossiaemeridionalis, which is closest relative to Microtus ochrogaster. We expect that using the full mitogenome to address taxonomic issues and study the related evolution events.
引用
收藏
页码:3682 / 3683
页数:2
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