The first complete mitochondrial genome of the Microtus ochrogaster

被引:6
|
作者
Cao, Wei [1 ,2 ]
Xia, Yan [3 ]
Dang, Xiao [3 ]
Xu, Qiwu [3 ]
机构
[1] Shanghai Jiao Tong Univ, Sch Biomed Engn, 1954 Huashan Rd, Shanghai 200030, Peoples R China
[2] Shanghai Jiao Tong Univ, Med Res Inst X, 1954 Huashan Rd, Shanghai 200030, Peoples R China
[3] Univ Chinese Acad Sci, BGI Educ Ctr, Shenzhen, Peoples R China
关键词
Microtus ochrogaster; mitogenome; phylogenetic; RODENTIA;
D O I
10.3109/19401736.2015.1079854
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Microtus ochrogaster, a small vole, found in central North America. Recently the genome sequencing had been done, but no more information of its mitochondrial reported. Herein, we first assembled the complete mitochondrial genome sequence of Microtus ochrogaster. It is a 16 292 bp long sequence with most mitogenome's characteristic structure, 13 protein-coding genes, two of rRNA genes, 22 of tRNA genes, one D-loop region, one repeat region, and three STS regions. The GC-content of our fresh sequence is 40%. It can verify the accuracy and utility of new determined mitogenome sequences by the phylogenetic analysis, based on the whole mitogenome alignment with Microtus fortis calamorum, Microtus levis, and Microtus rossiaemeridionalis, which is closest relative to Microtus ochrogaster. We expect that using the full mitogenome to address taxonomic issues and study the related evolution events.
引用
收藏
页码:3682 / 3683
页数:2
相关论文
共 50 条
  • [31] The complete mitochondrial genome of the Alticorpus geoffreyi
    Qi, Da-Shi
    Tao, Jin-Hao
    Huang, Xiao-Jing
    Jiang, Jie
    Wang, Mei
    Zhang, Lian-Qin
    Mei, Xin-Yu
    MITOCHONDRIAL DNA PART B-RESOURCES, 2016, 1 (01): : 404 - 405
  • [32] The complete mitochondrial genome of the Acropora cerealis
    Chen, Wenjing
    Tong, Fei
    Chen, PiMao
    Zhu, Aiyi
    Li, Dandan
    Long, Xinling
    Chen, Zicong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 1379 - 1380
  • [33] The complete mitochondrial genome of the Goniopora stokesi
    Chen, Wenjing
    Zhu, Aiyi
    Tong, Fei
    Li, Dandan
    Long, Xinling
    Chen, Zicong
    Chen, Pimao
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 713 - 714
  • [34] The complete mitochondrial genome of Stolephorus commersonii
    Qu, Liyan
    Ma, Chunyan
    Ma, Hongyu
    Dong, Yao
    Wang, Wei
    Ren, Guijing
    Ma, Lingbo
    MITOCHONDRIAL DNA PART B-RESOURCES, 2017, 2 (02): : 573 - 574
  • [35] The complete mitochondrial genome of the Babylonia lutosa
    Xiong, Gang
    Ma, Xiao
    Wang, Xiao-Qing
    Zhu, Dan-Li
    Wang, Lu-Ming
    Qin, Qin
    MITOCHONDRIAL DNA, 2015, 26 (02): : 187 - 188
  • [36] The complete mitochondrial genome of Dictyostelium intermedium
    Prommarit, Kamonchat
    Wonnapinij, Passorn
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (11): : 3174 - 3176
  • [37] Individual Discrimination by Odors in Sibling Prairie Voles (Microtus ochrogaster)
    Tang-Martinez, Zuleyma
    Bixler, Andrea
    JOURNAL OF CHEMICAL ECOLOGY, 2009, 35 (04) : 400 - 404
  • [38] The complete mitochondrial genome of the Fossorochromis rostratus
    Qi, Da-shi
    Zhang, Shi-Chun
    Jiang, Jie
    Zhang, Lian-Qin
    Fu, Yan-Yan
    Du, Zong-Ming
    Wang, Mei
    Huang, Xiao-Jing
    Wang, Yu-Lan
    Song, Yuan-Jian
    Zheng, Quan-Rong
    Xiong, Ye
    MITOCHONDRIAL DNA PART A, 2016, 27 (06) : 4284 - 4285
  • [39] The complete mitochondrial genome of the Sorex araneus
    Huang, Tianhong
    Dang, Xiao
    An, Mei
    Chen, Lingyun
    Zhang, Jianguo
    MITOCHONDRIAL DNA PART A, 2016, 27 (05) : 3655 - 3656
  • [40] The complete mitochondrial genome of the Goniopora lobata
    Peng, Huipai
    Zhang, Yanping
    Shen, Cheng
    Liu, Li
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 912 - 913