Structural and dynamic properties of four-way helical junctions in DNA molecules

被引:0
|
作者
Lilley, DMJ [1 ]
机构
[1] Univ Dundee, Dept Biochem, Canc Res UK Nucle Acid Struct Res Grp, Dundee DD1 5EH, Scotland
关键词
D O I
暂无
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Four-way helical junctions in DNA are the central intermediates in genetic recombination. In the presence of divalent metal ions they fold into the stacked X-structure by the pairwise coaxial stacking of helical arms. Exchange between alternative stacking conformers occurs in solution. The structure of four-way junctions is specifically recognised by proteins, notably by the resolving enzymes.
引用
收藏
页码:145 / 164
页数:20
相关论文
共 50 条
  • [21] Conformation and protein interactions of intramolecular DNA and phosphorothioate four-way junctions
    Troisi, Maria
    Klein, Mitchell
    Smith, Andrew C.
    Moorhead, Gaston
    Kebede, Yonatan
    Huang, Raymond
    Parker, Elliott
    Herrada, Hector
    Wade, Elizabeth
    Smith, Samara
    Broome, Payson
    Halsell, Jonah
    Estevez, Louis
    Bell, Anthony J., Jr.
    EXPERIMENTAL BIOLOGY AND MEDICINE, 2021, 246 (06) : 707 - 717
  • [22] Supporting data for the characterization of PNA-DNA four-way junctions
    Iverson, Douglas
    Serrano, Crystal
    Brahan, Ann Marie
    Shams, Arik
    Totsingan, Filbert
    Bell, Anthony J., Jr.
    DATA IN BRIEF, 2015, 5 : 756 - 760
  • [23] Molecular Logic Gates Connected through DNA Four-Way Junctions
    Lake, Alex
    Shang, Stephen
    Kolpashchikov, Dmitry M.
    ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2010, 49 (26) : 4459 - 4462
  • [24] Creating complex molecular topologies by configuring DNA four-way junctions
    Di Liu
    Gang Chen
    Usman Akhter
    Timothy M. Cronin
    Yossi Weizmann
    Nature Chemistry, 2016, 8 : 907 - 914
  • [25] Thermodynamic properties of an intramolecular DNA four-way junction
    Makube, N
    Klump, H
    Pikkemaat, J
    Altona, C
    ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 1999, 364 (01) : 53 - 60
  • [26] The chirality of a four-way helical junction in RNA
    Goody, TA
    Lilley, DMJ
    Norman, DG
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (13) : 4126 - 4127
  • [27] Analysis of Four-Way Junctions in RNA Structures
    Laing, Christian
    Schlick, Tamar
    JOURNAL OF MOLECULAR BIOLOGY, 2009, 390 (03) : 547 - 559
  • [28] Conformational flexibility of four-way junctions in RNA
    Hohng, S
    Wilson, TJ
    Tan, E
    Clegg, RM
    Lilley, DMJ
    Ha, TJ
    JOURNAL OF MOLECULAR BIOLOGY, 2004, 336 (01) : 69 - 79
  • [29] HMG box proteins bind to four-way DNA junctions in their open conformation
    Pöhler, JRG
    Norman, DG
    Bramham, J
    Bianchi, ME
    Lilley, DMJ
    EMBO JOURNAL, 1998, 17 (03): : 817 - 826
  • [30] Analysis of non-canonical three- and four-way DNA junctions
    McGorman, Brionna
    Poole, Simon
    Lopez, Miguel Vazquez
    Kellett, Andrew
    METHODS, 2023, 219 : 30 - 38