A subregion-based positron emission tomography/computed tomography (PET/CT) radiomics model for the classification of non-small cell lung cancer histopathological subtypes

被引:31
作者
Shen, Hui [1 ]
Chen, Ling [1 ]
Liu, Kanfeng [2 ]
Zhao, Kui [2 ]
Li, Jingsong [1 ]
Yu, Lijuan [3 ]
Ye, Hongwei [4 ]
Zhu, Wentao [1 ]
机构
[1] Zhejiang Lab, Res Ctr Healthcare Data Sci, Hangzhou 311121, Peoples R China
[2] Zhejiang Univ, Coll Med, Affiliated Hosp 1, PET Ctr, Hangzhou, Peoples R China
[3] Hainan Med Univ, Affiliated Canc Hosp, Haikou, Hainan, Peoples R China
[4] MinFound Med Syst Co Ltd, Shaoxing 312099, Peoples R China
基金
中国国家自然科学基金;
关键词
Subregion-based radiomics; positron emission tomography/computed tomography (PET/CT); nonsmall cell lung cancer (NSCLC); adenocarcinoma (ADC); squamous cell carcinoma (SCC); TUMOR HETEROGENEITY; FDG-PET/CT; CARCINOMA; IMAGES; ADENOCARCINOMA; EVOLUTION; THERAPY;
D O I
10.21037/qims-20-1182
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
Background: This study classifies lung adenocarcinoma (ADC) and squamous cell carcinoma (SCC) using subregion-based radiomics features extracted from positron emission tomography/computed tomography (PET/CT) images. Methods: In this study, the standard F-18-fluorodeoxyglucose (FDG) PET/CT images of 150 patients with lung ADC and 100 patients with SCC were retrospectively collected from the PET Center of the First Affiliated Hospital, College of Medicine, Zhejiang University. First, the 3D feature vector of each tumor voxel (whose basis is PET value, CT value, and CT local dominant orientation) was extracted. Using K-means individual clustering and population clustering, each tumor was divided into 4 subregions that reflect intratumoral regional heterogeneity. Next, based on each subregion, 385 radiomics features were extracted. Clinical features including age, gender, and smoking history were included. Thus, there were a total of 1,543 features extracted from PET/CT images and clinical reports. Statistical tests were then used to eliminate irrelevant and redundant features, and the recursive feature elimination (RFE) algorithm was used to select the best feature subset to classify SCC and ADC. Finally, 7 types of classifiers were tested to achieve the optimized model for the classification: support vector machine (SVM) with linear kernel, SVM with radial basis function kernel (SVM-RBF), random forest, logistic regression, Gaussian process classifier, linear discriminant analysis, and the AdaBoost classifier. Furthermore, 5-fold cross-validation was applied to obtain the sensitivity, specificity, accuracy, and area under the curve (AUC) for performance evaluation. Results: Our model exhibited the best performance with the subregion radiomics features and SVM-RBF classifier, with a 5-fold cross-validation sensitivity, specificity, accuracy, and AUC of 0.8538, 0.8758, 0.8623, and 0.9155, respectively. The interquartile range feature from subregion 2 of CT and the gender feature from the clinical reports are the 2 optimized features that achieved the highest comprehensive score. Conclusions: Our proposed model showed that SCC and ADC could be classified successfully using PET/CT images, which could be a promising tool to assist radiologists or medical physicists during diagnosis. The subregion-based method illustrated that non-small cell lung cancer (NSCLC) depicts intratumoral regional heterogeneity on both CT and PET images. By defining these heterogeneities through a subregion-based method, the diagnostic performance was improved. The 3D feature vector (whose basis is PET value, CT value, and CT local dominant orientation) showed superiority in reflecting NSCLC intratumoral regional heterogeneity.
引用
收藏
页码:2918 / +
页数:21
相关论文
共 43 条
[1]  
Afrose R, 2015, MED J DY PATIL U, V8, P447, DOI 10.4103/0975-2870.160783
[2]   The diagnosis of non-small cell lung cancer in the molecular era [J].
Brainard, Jennifer ;
Farver, Carol .
MODERN PATHOLOGY, 2019, 32 :16-26
[3]   USE OF GRAY VALUE DISTRIBUTION OF RUN LENGTHS FOR TEXTURE ANALYSIS [J].
CHU, A ;
SEHGAL, CM ;
GREENLEAF, JF .
PATTERN RECOGNITION LETTERS, 1990, 11 (06) :415-419
[4]   Histograms of oriented gradients for human detection [J].
Dalal, N ;
Triggs, B .
2005 IEEE COMPUTER SOCIETY CONFERENCE ON COMPUTER VISION AND PATTERN RECOGNITION, VOL 1, PROCEEDINGS, 2005, :886-893
[5]   IMAGE CHARACTERIZATIONS BASED ON JOINT GRAY LEVEL RUN LENGTH DISTRIBUTIONS [J].
DASARATHY, BV ;
HOLDER, EB .
PATTERN RECOGNITION LETTERS, 1991, 12 (08) :497-502
[6]   Limits of radiomic-based entropy as a surrogate of tumor heterogeneity: ROI-area, acquisition protocol and tissue site exert substantial influence [J].
Dercle, Laurent ;
Ammari, Samy ;
Bateson, Mathilde ;
Durand, Paul Blanc ;
Haspinger, Eva ;
Massard, Christophe ;
Jaudet, Cyril ;
Varga, Andrea ;
Deutsch, Eric ;
Soria, Jean-Charles ;
Ferte, Charles .
SCIENTIFIC REPORTS, 2017, 7
[7]   Pretreatment 18F-FDG PET/CT Radiomics Predict Local Recurrence in Patients Treated with Stereotactic Body Radiotherapy for Early-Stage Non-Small Cell Lung Cancer: A Multicentric Study [J].
Dissaux, Gurvan ;
Visvikis, Dimitris ;
Da-ano, Ronrick ;
Pradier, Olivier ;
Chajon, Enrique ;
Barillot, Isabelle ;
Duverge, Loig ;
Masson, Ingrid ;
Abgral, Ronan ;
Ribeiro, Maria-Joao Santiago ;
Devillers, Anne ;
Pallardy, Amandine ;
Fleury, Vincent ;
Mahe, Marc-Andre ;
De Crevoisier, Renaud ;
Hatt, Mathieu ;
Schick, Ulrike .
JOURNAL OF NUCLEAR MEDICINE, 2020, 61 (06) :814-820
[8]  
Edwards AT., 2010, BRIT J SURG, V26, P166, DOI 10.1002/bjs.18002610116
[9]   DCE-MRI texture analysis with tumor subregion partitioning for predicting Ki-67 status of estrogen receptor-positive breast cancers [J].
Fan, Ming ;
Cheng, Hu ;
Zhang, Peng ;
Gao, Xin ;
Zhang, Juan ;
Shao, Guoliang ;
Li, Lihua .
JOURNAL OF MAGNETIC RESONANCE IMAGING, 2018, 48 (01) :237-247
[10]   Lung Adenocarcinoma and Squamous Cell Carcinoma Gene Expression Subtypes Demonstrate Significant Differences in Tumor Immune Landscape [J].
Faruki, Hawazin ;
Mayhew, Gregory M. ;
Serody, Jonathan S. ;
Hayes, D. Neil ;
Perou, Charles M. ;
Lai-Goldman, Myla .
JOURNAL OF THORACIC ONCOLOGY, 2017, 12 (06) :943-953