Molecular characterization of two anther-specific genes encoding putative RNA-binding proteins, AtRBP45s, in Arabidopsis thaliana

被引:5
作者
Park, Jong-In
Endo, Makoto
Kazama, Tomohiko
Saito, Hiroshi
Hakozaki, Hirokazu
Takada, Yoshinobu
Kawagishi-Kobayashi, Makiko [1 ]
Watanabe, Masao
机构
[1] Natl Inst Crop Sci, Biotechnol Lab, Tsukuba, Ibaraki 3058518, Japan
[2] Tohoku Univ, Grad Sch Life Sci, Sendai, Miyagi 9808577, Japan
[3] PROBRAIN, Minato Ku, Tokyo 1050001, Japan
[4] Iwate Univ, Century Ctr Excellence Program 21, Morioka, Iwate 0208550, Japan
[5] Iwate Univ, Fac Agr, Morioka, Iwate 0208550, Japan
[6] Osaka Kyoiku Univ, Div Nat Sci, Kashiwa, Chiba 5828582, Japan
关键词
anther-specific genes; Arabidopsis thaliana; gene family; putative RNA-binding proteins; RRM domain;
D O I
10.1266/ggs.81.355
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
RRM (RNA-recognition motif) domain is important for the post-transcriptional regulation of gene expression including RNA processing. In our previous study, we found one anther- and/or pollen-specific gene (LjRRM1, previously named as LjMfb-U93) in model legume, Lotus japonicus. Because of the richness of genomic information of another model plant, Arabidopsis thaliana, for functional analysis, we identified and characterized the orthologous genes in A. thaliana. By comparison of the partial nucleotide sequence of LjRRM1 to the public database, we identified three homologous genes (AtRBP45a, AtRBP45b, and AtRBP45c) in A. thaliana genome. Based on promoter analysis, both AtRBP45a and AtRBP45c were specifically expressed in immature anther tissues (tapetum cells) and mature pollen grains of transgenic plants. This expression pattern of AtRBP45a and AtRBP45c is quite similar to that of LjRRM1, indicating that AtRBP45a and AtRBP45c would be orthologous to LjRRM1. Because in another previous experiment, it was shown that proteins having RRM domains were related to pre-mRNA maturation, and as a conclusion, it is possible that LjRRM1, AtRBP45a, and AtRBP45c genes encoding RNA-binding proteins are functionally involved in the repression of translation in mature pollen grains in L. japonicus and A. thaliana.
引用
收藏
页码:355 / 359
页数:5
相关论文
共 27 条
  • [1] Plant proteins containing the RNA-recognition motif
    Alba, MM
    Pages, M
    [J]. TRENDS IN PLANT SCIENCE, 1998, 3 (01) : 15 - 21
  • [2] Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
    Altschul, SF
    Madden, TL
    Schaffer, AA
    Zhang, JH
    Zhang, Z
    Miller, W
    Lipman, DJ
    [J]. NUCLEIC ACIDS RESEARCH, 1997, 25 (17) : 3389 - 3402
  • [3] Floral dip:: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana
    Clough, SJ
    Bent, AF
    [J]. PLANT JOURNAL, 1998, 16 (06) : 735 - 743
  • [4] mRNA stabilization by poly(A) binding protein is independent of poly(A) and requires translation
    Coller, JM
    Gray, NK
    Wickens, MP
    [J]. GENES & DEVELOPMENT, 1998, 12 (20) : 3226 - 3235
  • [5] A low-temperature-responsive gene from barley encodes a protein with single-stranded nucleic acid-binding activity which is phosphorylated in vitro
    Dunn, MA
    Brown, K
    Lightowlers, R
    Hughes, MA
    [J]. PLANT MOLECULAR BIOLOGY, 1996, 30 (05) : 947 - 959
  • [6] Analysis of expressed sequence tags of flower buds in Lotus japonicus
    Endo, M
    Kokubun, T
    Takahata, Y
    Higashitani, A
    Tabata, S
    Watanabe, M
    [J]. DNA RESEARCH, 2000, 7 (03) : 213 - 216
  • [7] Identification and molecular characterization of novel anther-specific genes in Oryza sativa L. by using cDNA microarray
    Endo, M
    Tsuchiya, T
    Saito, H
    Matsubara, H
    Hakozaki, H
    Masuko, H
    Kamada, M
    Higashitani, A
    Takahashi, H
    Fukuda, H
    Demura, T
    Watanabe, M
    [J]. GENES & GENETIC SYSTEMS, 2004, 79 (04) : 213 - 226
  • [8] The advantages of cDNA microarray as an effective tool for identification of reproductive organ-specific genes in a model legume, Lotus japonicus
    Endo, M
    Matsubara, H
    Kokubun, T
    Masuko, H
    Takahata, Y
    Tsuchiya, T
    Fukuda, H
    Demura, T
    Watanabe, M
    [J]. FEBS LETTERS, 2002, 514 (2-3) : 229 - 237
  • [9] Generation of 919 expressed sequence tags from immature flower buds and gene expression analysis using expressed sequence tags in the model plant Lotus japonicus
    Endo, M
    Hakozaki, H
    Kokubun, T
    Masuko, H
    Takahata, Y
    Tsuchiya, T
    Higashitani, A
    Tabata, S
    Watanabe, M
    [J]. GENES & GENETIC SYSTEMS, 2002, 77 (04) : 277 - 282
  • [10] RNA-binding proteins in plants: the tip of an iceberg?
    Fedoroff, NV
    [J]. CURRENT OPINION IN PLANT BIOLOGY, 2002, 5 (05) : 452 - 459