Semiparametric Bayesian Analysis of Nutritional Epidemiology Data in the Presence of Measurement Error

被引:13
作者
Sinha, Samiran [1 ]
Mallick, Bani K. [1 ]
Kipnis, Victor [2 ]
Carroll, Raymond J. [1 ]
机构
[1] Texas A&M Univ, Dept Stat, College Stn, TX 77843 USA
[2] NCI, Biometry Res Grp, Div Canc Prevent & Control, Bethesda, MD 20892 USA
关键词
B-splines; Dirichlet process prior; Gibbs sampling; Measurement error; Metropolis-Hastings algorithm; Partly linear model; NONPARAMETRIC REGRESSION; IN-VARIABLES; NATIONAL-INSTITUTES; SPLINES; MODEL; INFERENCE; DENSITY; COHORT; HEALTH; DIET;
D O I
10.1111/j.1541-0420.2009.01309.x
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
We propose a semiparametric Bayesian method for handling measurement error in nutritional epidemiological data. Our goal is to estimate nonparametrically the form of association between a disease and exposure variable while the true values of the exposure are never observed. Motivated by nutritional epidemiological data, we consider the setting where a surrogate covariate is recorded in the primary data, and a calibration data set contains information on the surrogate variable and repeated measurements of an unbiased instrumental variable of the true exposure. We develop a flexible Bayesian method where not only is the relationship between the disease and exposure variable treated semiparametrically, but also the relationship between the surrogate and the true exposure is modeled semiparametrically. The two nonparametric functions are modeled simultaneously via B-splines. In addition, we model the distribution of the exposure variable as a Dirichlet process mixture of normal distributions, thus making its modeling essentially nonparametric and placing this work into the context of functional measurement error modeling. We apply our method to the NIH-AARP Diet and Health Study and examine its performance in a simulation study.
引用
收藏
页码:444 / 454
页数:11
相关论文
共 22 条
[1]  
[Anonymous], 2003, Semiparametric Regression
[2]   Bayesian smoothing and regression splines for measurement error problems [J].
Berry, SM ;
Carroll, RJ ;
Ruppert, D .
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 2002, 97 (457) :160-169
[3]  
Carroll J., 2006, MEASUREMENT ERROR NO, V2nd edn, DOI [10.1201/9781420010138, DOI 10.1201/9781420010138]
[4]   Nonlinear and nonparametric regression and instrumental variables [J].
Carroll, RJ ;
Ruppert, D ;
Crainiceanu, CM ;
Tosteson, TD ;
Karagas, MR .
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 2004, 99 (467) :736-750
[5]   OPTIMAL RATES OF CONVERGENCE FOR DECONVOLVING A DENSITY [J].
CARROLL, RJ ;
HALL, P .
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 1988, 83 (404) :1184-1186
[6]   Using SIMEX for smoothing-parameter choice in errors-in-variables problems [J].
Delaigle, Aurore ;
Hall, Peter .
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 2008, 103 (481) :280-287
[7]   BAYESIAN DENSITY-ESTIMATION AND INFERENCE USING MIXTURES [J].
ESCOBAR, MD ;
WEST, M .
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 1995, 90 (430) :577-588
[8]   NONPARAMETRIC REGRESSION WITH ERRORS-IN-VARIABLES [J].
FAN, JQ ;
TRUONG, YK .
ANNALS OF STATISTICS, 1993, 21 (04) :1900-1925
[9]   Generalized nonlinear modeling with multivariate free-knot regression splines [J].
Holmes, CC ;
Mallick, BK .
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 2003, 98 (462) :352-368
[10]   Structured measurement error in nutritional epidemiology: applications in the pregnancy, infection, and nutrition (PIN) study [J].
Johnson, Brent A. ;
Herring, Amy H. ;
Ibrahim, Joseph G. ;
Siega-Riz, Anna Maria .
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 2007, 102 (479) :856-866