MicroRNA expression differentiates between primary lung tumors and metastases to the lung

被引:79
作者
Barshack, Iris [1 ,2 ]
Lithwick-Yanai, Gila [3 ]
Afek, Arnon [1 ,2 ]
Rosenblatt, Kinneret [1 ,2 ]
Tabibian-Keissar, Hila [1 ]
Zepeniuk, Merav [3 ]
Cohen, Lahav [3 ]
Dan, Harel [3 ]
Zion, Orit [3 ]
Strenov, Yulia [4 ]
Polak-Charcon, Sylvie [1 ,2 ]
Perelman, Marina [1 ,2 ]
机构
[1] Chaim Sheba Med Ctr, Dept Pathol, IL-52621 Tel Hashomer, Israel
[2] Tel Aviv Univ, Sackler Sch Med, IL-69978 Tel Aviv, Israel
[3] Rosetta Genom Ltd, IL-76706 Rehovot, Israel
[4] Beilinson Med Ctr, Rabin Med Ctr, Dept Pathol, IL-49100 Petah Tiqwa, Israel
关键词
MicroRNA; Hsa-miR-182; Hsa-miR-126; Lung cancer; TRANSCRIPTION FACTOR-I; GENE-EXPRESSION; MIR-200; FAMILY; MESENCHYMAL TRANSITION; CANCER-DIAGNOSIS; REPRESSORS ZEB1; ADENOCARCINOMA; SIGNATURE; PULMONARY; PROFILES;
D O I
10.1016/j.prp.2010.03.005
中图分类号
R36 [病理学];
学科分类号
100104 ;
摘要
For surgical pathologists, distinguishing whether a pulmonary neoplasm is primary or metastatic can be challenging, and current biomarkers do not always aid lung tumor classification. The tissue-associated expression of microRNA likely explains the remarkable finding that many tumors can be classified based solely on their microRNA expression signature. Here we show that microRNAs can serve as biomarkers for lung tumor classification. Using microRNA microarray data generated from 76 formalin-fixed, paraffin-embedded (FFPE) samples of either primary lung cancer or metastatic tumors to the lung, we have identified a set of microRNAs expressed differentially between these two groups. This set includes hsa-miR-182, which was most strongly over-expressed in the lung primary tumors, and hsa-miR-126, which was over-expressed in the metastatic tumors. The differential expression of this set of microRNAs was confirmed using qRT-PCR on a set of 54 samples. In light of our data, microRNA expression should be considered as a potential clinical biomarker for surgical pathologists faced with discerning the tumor type of an inscrutable lung neoplasm. (C) 2010 Elsevier GmbH. All rights reserved.
引用
收藏
页码:578 / 584
页数:7
相关论文
共 68 条
[1]  
ABRAMS HL, 1950, CANCER, V3, P74, DOI 10.1002/1097-0142(1950)3:1<74::AID-CNCR2820030111>3.0.CO
[2]  
2-7
[3]   A place for RNAi [J].
Anderson, P .
DEVELOPMENTAL CELL, 2005, 9 (03) :311-312
[4]   Gene-expression profiles predict survival of patients with lung adenocarcinoma [J].
Beer, DG ;
Kardia, SLR ;
Huang, CC ;
Giordano, TJ ;
Levin, AM ;
Misek, DE ;
Lin, L ;
Chen, GA ;
Gharib, TG ;
Thomas, DG ;
Lizyness, ML ;
Kuick, R ;
Hayasaka, S ;
Taylor, JMG ;
Iannettoni, MD ;
Orringer, MB ;
Hanash, S .
NATURE MEDICINE, 2002, 8 (08) :816-824
[5]  
Bejarano PA, 2003, ARCH PATHOL LAB MED, V127, P193
[6]  
Bejarano PA, 1996, MODERN PATHOL, V9, P445
[7]   Identification of hundreds of conserved and nonconserved human microRNAs [J].
Bentwich, I ;
Avniel, A ;
Karov, Y ;
Aharonov, R ;
Gilad, S ;
Barad, O ;
Barzilai, A ;
Einat, P ;
Einav, U ;
Meiri, E ;
Sharon, E ;
Spector, Y ;
Bentwich, Z .
NATURE GENETICS, 2005, 37 (07) :766-770
[8]   A novel microarray approach reveals new tissue-specific signatures of known and predicted mammalian microRNAs [J].
Beuvink, Iwan ;
Kolb, Fabrice A. ;
Budach, Wolfgang ;
Garnier, Arlette ;
Lange, Joerg ;
Natt, Francois ;
Dengler, Uwe ;
Hall, Jonathan ;
Filipowicz, Witold ;
Weiler, Jan .
NUCLEIC ACIDS RESEARCH, 2007, 35 (07)
[9]   Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinoma subclasses [J].
Bhattacharjee, A ;
Richards, WG ;
Staunton, J ;
Li, C ;
Monti, S ;
Vasa, P ;
Ladd, C ;
Beheshti, J ;
Bueno, R ;
Gillette, M ;
Loda, M ;
Weber, G ;
Mark, EJ ;
Lander, ES ;
Wong, W ;
Johnson, BE ;
Golub, TR ;
Sugarbaker, DJ ;
Meyerson, M .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (24) :13790-13795
[10]   A double-negative feedback loop between ZEB1-SIP1 and the microRNA-200 family regulates epithelial-mesenchymal transition [J].
Bracken, Cameron P. ;
Gregory, Philip A. ;
Kolesnikoff, Natasha ;
Bert, Andrew G. ;
Wang, Jun ;
Shannon, M. Frances ;
Goodall, Gregory J. .
CANCER RESEARCH, 2008, 68 (19) :7846-7854