Comparing species distribution models: a case study of four deep sea urchin species

被引:51
作者
Gonzalez-Irusta, Jose M. [1 ]
Gonzalez-Porto, Marcos [2 ]
Sarralde, Roberto [2 ]
Arrese, Beatriz [3 ]
Almon, Bruno [2 ]
Martin-Sosa, Pablo [2 ]
机构
[1] Marine Scotland, Marine Lab, Aberdeen AB11 9DB, Scotland
[2] Inst Espanol Oceanog, Ctr Oceanog Canarias, Santa Cruz De Tenerife 38011, Canary Islands, Spain
[3] Inst Espanol Oceanog, Madrid 28002, Spain
关键词
Species distribution models; Sea urchins; Niche; Presence-only; PREDICTING SUITABLE HABITAT; PRESENCE-ONLY DATA; SUITABILITY; CONSERVATION; ECHINOIDS; ERRORS; PROTECTION; AGREEMENT; ABSENCE; CORALS;
D O I
10.1007/s10750-014-2090-3
中图分类号
Q17 [水生生物学];
学科分类号
071004 ;
摘要
There is an increasing demand for biodiversity mapping to address new challenges in the management of marine ecosystems. Species distribution models are a key tool in supplying part of this information. However, the use of these models in the marine environment is still developing and the reasons for the underlying use of different methodological approaches are not always clear. In this work, we compared four different statistical techniques: the ecological niche factor analysis (ENFA), the MAXimun ENTropy algorithm (MAXENT), general additive Models (GAMs), and Random Forest. ENFA and MAXENT were applied using presence-only data whereas GAM and Random Forest used presence-absence data. As a case study, we used four deep sea urchin species: Centrostephanus longispinus, Coelopleurus floridanus, Stylocidaris affinis, and Cidaris cidaris. The distribution of the studied sea urchins showed strong bathymetric segregation. Depth was the most important variable, followed by reflectivity and slope. The correlations between the predictive outputs of the models were similar between GAM, Random Forest and MAXENT, and lower for ENFA. Models using presence/absence data showed the highest scores in the four species, significantly outperforming ENFA in most of the cases, although differences with MAXENT were significant in only one species.
引用
收藏
页码:43 / 57
页数:15
相关论文
共 66 条
[21]   A review of methods for the assessment of prediction errors in conservation presence/absence models [J].
Fielding, AH ;
Bell, JF .
ENVIRONMENTAL CONSERVATION, 1997, 24 (01) :38-49
[22]   Conservation of Mediterranean seascapes: analyses of existing protection schemes [J].
Fraschetti, S ;
Terlizzi, A ;
Bussotti, S ;
Guarnieri, G ;
D'Ambrosio, P ;
Boero, F .
MARINE ENVIRONMENTAL RESEARCH, 2005, 59 (04) :309-332
[23]   Predicting suitable habitat for the European lobster (Homarus gammarus), on the Basque continental shelf (Bay of Biscay), using Ecological-Niche Factor Analysis [J].
Galparsoro, Ibon ;
Borja, Angel ;
Bald, Juan ;
Liria, Pedro ;
Chust, Guillem .
ECOLOGICAL MODELLING, 2009, 220 (04) :556-567
[24]   Modelling and mapping the local distribution of representative species on the Le Danois Bank, El Cachucho Marine Protected Area (Cantabrian Sea) [J].
Garcia-Alegre, Ana ;
Sanchez, Francisco ;
Gomez-Ballesteros, Maria ;
Hinz, Hilmar ;
Serrano, Alberto ;
Parra, Santiago .
DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY, 2014, 106 :151-164
[25]   Distribution of benthic macrofaunal communities in the western Baltic Sea with regard to near-bottom environmental parameters. 1. Causal analysis [J].
Gogina, Mayya ;
Glockzin, Michael ;
Zettler, Michael L. .
JOURNAL OF MARINE SYSTEMS, 2010, 79 (1-2) :112-123
[26]   Environmental and fisheries effects on Gracilechinus acutus (Echinodermata: Echinoidea) distribution: is it a suitable bioindicator of trawling disturbance? [J].
Gonzalez-Irusta, J. M. ;
Punzon, A. ;
Serrano, A. .
ICES JOURNAL OF MARINE SCIENCE, 2012, 69 (08) :1457-1465
[27]   Trawling disturbance on the isotopic signature of a structure-building species, the sea urchin Gracilechinus acutus (Lamarck, 1816) [J].
Gonzalez-Irusta, Jose M. ;
Preciado, Izaskun ;
Lopez-Lopez, Lucia ;
Punzon, Antonio ;
Cartes, Joan E. ;
Serrano, Alberto .
DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY, 2014, 106 :216-224
[28]   The influence of spatial errors in species occurrence data used in distribution models [J].
Graham, Catherine H. ;
Elith, Jane ;
Hijmans, Robert J. ;
Guisan, Antoine ;
Peterson, A. Townsend ;
Loiselle, Bette A. .
JOURNAL OF APPLIED ECOLOGY, 2008, 45 (01) :239-247
[29]   High seas marine protected areas: Benthic environmental conservation priorities from a GIS analysis of global ocean biophysical data [J].
Harris, Peter T. ;
Whiteway, Tanya .
OCEAN & COASTAL MANAGEMENT, 2009, 52 (01) :22-38
[30]  
Hastie TJ, 2017, Generalized Additive Models, P249, DOI DOI 10.1201/9780203738535