Description of Algoriphagus taiwanensis sp nov., a xylanolytic bacterium isolated from surface seawater, and emended descriptions of Algoriphagus mannitolivorans, Algoriphagus olei, Algoriphagus aquatilis and Algoriphagus ratkowskyi

被引:11
|
作者
Shahina, Mariyam [1 ]
Hameed, Asif [1 ]
Lin, Shih-Yao [1 ]
Lai, Wei-An [1 ]
Hsu, Yi-Han [1 ]
Young, Chiu-Chung [1 ,2 ]
机构
[1] Natl Chung Hsing Univ, Dept Soil & Environm Sci, Coll Agr & Nat Resources, Taichung 402, Taiwan
[2] Natl Chung Hsing Univ, Agr Biotechnol Ctr, Taichung 402, Taiwan
来源
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY | 2014年 / 106卷 / 05期
关键词
Cyclobacteriaceae; Xylan-degrading; Phosphatidylserine; Phosphatidylcholine; ET-AL; 2003; TIDAL FLAT; GEN; NOV; ALKALIPHILIC BACTERIUM; HONGIELLA YI; SEA-WATER; MEMBER; ACID; DNA;
D O I
10.1007/s10482-014-0272-7
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel, Gram-stain negative, strictly aerobic, oval or rod-shaped, red-pigmented, non-sporeforming xylanolytic bacterial strain, designated CC-PR-82(T), was isolated from surface seawater of Pingtung coast, Taiwan, and characterized by polyphasic taxonomy. Strain CC-PR-82(T) shared highest pairwise 16S rRNA gene sequence similarity to Algoriphagus mannitolivorans IMSNU 14012(T) (97.0 %) followed by 'A. boseongensis' BS-R1(T) (96.5 %) and A. olei CC-Hsuan-617(T) (95.6 %), whereas other (n = 26) Algoriphapus species shared 95.6-92.6 % sequence similarities. The novel strain further established a distinct phyletic lineage tightly associated withAlgoriphagus species. The DNA-DNA hybridization value obtained between CC-PR-82(T) and A. mannitolivorans DSM 15301(T) was 29.0 % (33.4 % reciprocal using A. mannitolivorans DSM 15301(T) probe). The major ([5 % of total) fatty acids were identified as iso-C-15:0, C-16:1 omega 6c and/or C-16:1 omega 7c, iso-C-16:0, iso-C-17:1 omega 9c and/or C-16:0 10-methyl, anteiso-C-15:0 and C-17:1 omega 6c. Polar lipids includedmajor amounts of an unidentified aminolipid and an unidentified lipid; moderate amounts of phosphatidylethanolamine, phosphatidylserine and an unidentified aminolipid; trace amounts of an unidentified phospholipid, an unidentified lipid and an unidentified glycolipid. The DNA G+C contentwas determined to be 42.3 mol%. Menaquinone-7 was the sole respiratory quinone. Based on the polyphasic characteristics, that are in line with those of Algoriphagus species, in addition to distinguishing phylogenetic and phenotypic features, strain CC-PR-82(T) appears to represent a novel species of the genus Algoriphagus, for which the name Algoriphagus taiwanensis sp. nov. (type strain CC-PR-82(T) = JCM19755(T) = BCRC 80746(T)) is proposed. In addition, emended descriptions of the species A. mannitolivorans, A. aquatilis, A. olei and A. ratkowskyi are also proposed.
引用
收藏
页码:1031 / 1040
页数:10
相关论文
共 50 条
  • [1] Description of Algoriphagus taiwanensis sp. nov., a xylanolytic bacterium isolated from surface seawater, and emended descriptions of Algoriphagus mannitolivorans, Algoriphagus olei, Algoriphagus aquatilis and Algoriphagus ratkowskyi
    Mariyam Shahina
    Asif Hameed
    Shih-Yao Lin
    Wei-An Lai
    Yi-Han Hsu
    Chiu-Chung Young
    Antonie van Leeuwenhoek, 2014, 106 : 1031 - 1040
  • [2] Algoriphagus marinus sp nov., isolated from marine sediment and emended description of the genus Algoriphagus
    Han, Ji-Ru
    Geng, Qing-Li
    Wang, Feng-Qing
    Du, Zong-Jun
    Chen, Guan-Jun
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2017, 67 (07) : 2412 - 2417
  • [3] Algoriphagus aquatilis sp nov., isolated from a freshwater lake
    Liu, Ying
    Li, Hao
    Jiang, Jia-Tong
    Liu, Ying-Hao
    Song, Xue-Feng
    Xu, Cheng-Jun
    Liu, Zhi-Pei
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2009, 59 : 1759 - 1763
  • [4] Algoriphagus jejuensis sp nov., isolated from seawater
    Lee, Dong-Heon
    Kahng, Hyung-Yeel
    Lee, Sun Bok
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2012, 62 : 409 - 413
  • [5] Algoriphagus namhaensis sp nov., isolated from seawater
    Oh, Ki-Hoon
    Kang, So-Jung
    Lee, Soo-Young
    Park, Sooyeon
    Oh, Tae-Kwang
    Yoon, Jung-Hoon
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2012, 62 : 575 - 579
  • [6] Algoriphagus pacificus sp. nov. and Algoriphagus oliviformis sp. nov., isolated from a mariculture fishpond
    Lu, Huibin
    Cai, Zhipeng
    Deng, Tongchu
    Qian, Youfeng
    Xu, Meiying
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2021, 71 (07)
  • [7] Algoriphagus aquaeductus sp nov., isolated from a freshwater pipe
    Rau, Jan Erik
    Blotevogel, Karl-Heinz
    Fischer, Ulrich
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2012, 62 : 675 - 682
  • [8] Algoriphagus olei sp nov., isolated from oil-contaminated soil
    Young, Chiu-Chung
    Lin, Shi-Yao
    Arun, A. B.
    Shen, Fo-Ting
    Chen, Wen-Ming
    Rekha, P. D.
    Langer, Stefan
    Busse, Hans-Juergen
    Wu, Yun-Hsuan
    Kaempfer, Peter
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2009, 59 : 2909 - 2915
  • [9] Algoriphagus aquimaris sp. nov., isolated from seashore sand
    Kim, Jinsoo
    Yoon, Sung-Ho
    Yang, Keun-Hyeok
    Kim, Sungchul
    Lee, Sang-Seob
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2020, 70 (02) : 721 - 731
  • [10] Description of Algoriphagus iocasae sp nov., isolated from deep-sea sediment
    Sun, Qing-lei
    Sun, Li
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2017, 67 (02) : 243 - 249