Multigrid priors for a Bayesian approach to fMRI

被引:6
作者
Amaral, SDR [1 ]
Rabbani, SR [1 ]
Caticha, N [1 ]
机构
[1] Univ Sao Paulo, Dept Fis Geral, Inst Fis, BR-05508900 Sao Paulo, Brazil
基金
巴西圣保罗研究基金会;
关键词
fMRI; Bayesian data analysis; prior information;
D O I
10.1016/j.neuroimage.2004.06.011
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
We introduce multigrid priors to construct a Bayesian-inspired method to asses brain activity in functional magnetic resonance imaging (fMRI). A sequence of different scale grids is constructed over the image. Starting from the finest scale, coarse grain data variables are sequentially defined for each scale. Then we move back to finer scales, determining for each coarse scale a set of posterior probabilities. The posterior on a coarse scale is used as the prior for activity at the next finer scale. To test the method, we use a linear model with a given hemodynamic response function to construct the likelihood. We apply the method both to real and simulated data of a boxcar experiment. To measure the number of errors, we impose a decision to determine activity by setting a threshold on the posterior. Receiver operating characteristic (ROC) curves are used to study the dependence on threshold and on a few hyperparameters in the relation between specificity and sensitivity. We also study the deterioration of the results for real data, under information loss. This is done by decreasing the number of images in each period and also by decreasing the signal to noise ratio and compare the robustness to other methods. (C) 2004 Elsevier Inc. All rights reserved.
引用
收藏
页码:654 / 662
页数:9
相关论文
共 17 条
  • [1] FUNCTIONAL MAPPING OF THE HUMAN VISUAL-CORTEX BY MAGNETIC-RESONANCE-IMAGING
    BELLIVEAU, JW
    KENNEDY, DN
    MCKINSTRY, RC
    BUCHBINDER, BR
    WEISSKOFF, RM
    COHEN, MS
    VEVEA, JM
    BRADY, TJ
    ROSEN, BR
    [J]. SCIENCE, 1991, 254 (5032) : 716 - 719
  • [2] Bernardo J., 2003, BAYESIAN THEORY
  • [3] CATICHA A, 2004, IN PRESS PRE
  • [4] Shannon entropy applied to the analysis of event-related fMRI time series
    de Araujo, DB
    Tedeschi, W
    Santos, AC
    Elias, J
    Neves, UPC
    Baffa, O
    [J]. NEUROIMAGE, 2003, 20 (01) : 311 - 317
  • [5] FEDORENKO RP, 1964, USSR COMPUT MATH PHY, V4
  • [6] FEDORENKO RP, 1989, ZH VYCHISL MAT FIZ, V4
  • [7] Classical and Bayesian inference in neuroimaging: Theory
    Friston, KJ
    Penny, W
    Phillips, C
    Kiebel, S
    Hinton, G
    Ashburner, J
    [J]. NEUROIMAGE, 2002, 16 (02) : 465 - 483
  • [8] MULTIGRID MONTE-CARLO METHOD - CONCEPTUAL FOUNDATIONS
    GOODMAN, J
    SOKAL, AD
    [J]. PHYSICAL REVIEW D, 1989, 40 (06) : 2035 - 2071
  • [9] Bayesian modeling of the hemodynamic response function in BOLD fMRI
    Gössl, C
    Fahrmeir, L
    Auer, DP
    [J]. NEUROIMAGE, 2001, 14 (01) : 140 - 148
  • [10] Multivariate autoregressive modeling of fMRI time series
    Harrison, L
    Penny, WD
    Friston, KJ
    [J]. NEUROIMAGE, 2003, 19 (04) : 1477 - 1491