Stereoselectivity and Structural Characterization of an Irvine Reductase (IRED) from Amycolatopsis orientalis

被引:107
作者
Aleku, Godwin A. [1 ]
Man, Henry [2 ]
France, Scott P. [1 ]
Leipold, Friedemann [1 ]
Hussain, Shahed [1 ]
Toca-Gonzalez, Laura [1 ]
Marchington, Rebecca [1 ]
Hart, Sam [2 ]
Turkenburg, Johan P. [2 ]
Grogan, Gideon [2 ]
Turner, Nicholas J. [1 ]
机构
[1] Univ Manchester, Sch Chem, Manchester Inst Biotechnol, 131 Princess St, Manchester M1 7DN, Lancs, England
[2] Univ York, Dept Chem, York Struct Biol Lab, York YO10 5DD, N Yorkshire, England
基金
英国生物技术与生命科学研究理事会; 英国工程与自然科学研究理事会;
关键词
biocatalysis; chiral amine; imine reductase; oxidoreductase; NADPH; OPTICALLY-ACTIVE AMINES; ASYMMETRIC REDUCTION; (R)-IMINE REDUCTASE; IMINE REDUCTASE; PAENIBACILLUS-LACTIS; SELECTIVE REDUCTION; (S)-IMINE REDUCTASE; CHIRAL AMINES; CYCLIC IMINES; DEHYDROGENASE;
D O I
10.1021/acscatal.6b00782
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The imine reductase AoIRED from Amycolatopsis orientalis (Uniprot R4SNK4) catalyzes the NADPHdependent reduction of a wide range of prochiral imines and iminium ions, predominantly with (S)-selectivity and with ee's of up to >99%. AoIRED displays up to 100-fold greater catalytic efficiency for 2-methyl-l-pyrroline (2MPN) compared to other IREDs, such as the enzyme from Streptomyces sp. GF3546, which also exhibits (S)-selectivity, and thus, AoIRED is an interesting candidate for preparative synthesis. AoIRED exhibits unusual catalytic properties, with inversion of stereoselectivity observed between structurally similar substrates, and also, in the case of 1-methyl-3,4-dihydroisoquinoline, for the same substrate, dependent on the age of the enzyme after purification. The structure of AoIRED has been determined in an "open" apo-form, revealing a canonical dimeric IRED fold in which the active site is formed between the N- and C-terminal domains of participating monomers. Co-crystallization with NADPH gave a "closed" form in complex with the cofactor, in which a relative closure of domains, and associated loop movements, has resulted in a much smaller active site. A ternary complex was also obtained by cocrystallization with NADPH and 1-methyl-1,2,3,4-tetrahydroisoquinoline [(MTC1], and it reveals a binding site for the (R)-amine product, which places the chiral carbon within 4 angstrom of the putative location of the C4 atom of NADPH that delivers hydride to the C=N bond of the substrate. The ternary complex has permitted structure-informed mutation of the active site, resulting in mutants including Y179A, Y179F, and N241A, of altered activity and stereoselectivity.
引用
收藏
页码:3880 / 3889
页数:10
相关论文
共 40 条
[1]   Development of an Amine Dehydrogenase for Synthesis of Chiral Amines [J].
Abrahamson, Michael J. ;
Vazquez-Figueroa, Eduardo ;
Woodall, Nicholas B. ;
Moore, Jeffrey C. ;
Bommarius, Andreas S. .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2012, 51 (16) :3969-3972
[2]  
Buchholz S., 2006, BIOCATALYSIS PHARM B, P829
[3]   Asymmetric Amination of Secondary Alcohols by using a Redox-Neutral Two-Enzyme Cascade [J].
Chen, Fei-Fei ;
Liu, You-Yan ;
Zheng, Gao-Wei ;
Xu, Jian-He .
CHEMCATCHEM, 2015, 7 (23) :3838-3841
[4]   Coot:: model-building tools for molecular graphics [J].
Emsley, P ;
Cowtan, K .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2004, 60 :2126-2132
[5]   Scaling and assessment of data quality [J].
Evans, P .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2006, 62 :72-82
[6]   Highlights of Transition Metal-Catalyzed Asymmetric Hydrogenation of Imines [J].
Fleury-Bregeot, Nicolas ;
de la Fuente, Veronica ;
Castillon, Sergio ;
Claver, Carmen .
CHEMCATCHEM, 2010, 2 (11) :1346-1371
[7]   The ID23-2 structural biology microfocus beamline at the ESRF [J].
Flot, David ;
Mairs, Trevor ;
Giraud, Thierry ;
Guijarro, Matias ;
Lesourd, Marc ;
Rey, Vicente ;
van Brussel, Denis ;
Morawe, Christian ;
Borel, Christine ;
Hignette, Olivier ;
Chavanne, Joel ;
Nurizzo, Didier ;
McSweeney, Sean ;
Mitchell, Edward .
JOURNAL OF SYNCHROTRON RADIATION, 2010, 17 :107-118
[8]   Characterization of three novel enzymes with imine reductase activity [J].
Gand, M. ;
Muller, H. ;
Wardenga, R. ;
Hohne, M. .
JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, 2014, 110 :126-132
[9]   Engineering an Enantioselective Amine Oxidase for the Synthesis of Pharmaceutical Building Blocks and Alkaloid Natural Products [J].
Ghislieri, Diego ;
Green, Anthony P. ;
Pontini, Marta ;
Willies, Simon C. ;
Rowles, Ian ;
Frank, Annika ;
Grogan, Gideon ;
Turner, Nicholas J. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2013, 135 (29) :10863-10869
[10]   Pteridine reductase mechanism correlates pterin metabolism with drug resistance in trypanosomatid parasites [J].
Gourley, DG ;
Schüttelkopf, AW ;
Leonard, GA ;
Luba, J ;
Hardy, LW ;
Beverley, SM ;
Hunter, WN .
NATURE STRUCTURAL BIOLOGY, 2001, 8 (06) :521-525